Gene
RNA
| Item | Value |
|---|---|
| gene id | G1816423 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 46696516 ~ 46698947 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2078066 | True | 298 | lncRNA | 0.44 | 2 | 46696516 | 46698947 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ints6 | LOC106582497 | coding | downstream | 539544 | 46119388 ~ 46156972 (-) |
| LOC118943596 | NA | coding | downstream | 668010 | 46011115 ~ 46028506 (-) |
| LOC110501932 | LOC106582487 | coding | downstream | 970122 | 45702953 ~ 45726394 (-) |
| LOC110501943 | NA | coding | downstream | 1108804 | 45582551 ~ 45587712 (-) |
| LOC110501933 | LOC106582484 | coding | downstream | 1117610 | 45550854 ~ 45578906 (-) |
| spopla | spopl | coding | upstream | 170884 | 46869775 ~ 46974132 (-) |
| LOC110501995 | hnmt | coding | upstream | 343278 | 47042225 ~ 47061327 (-) |
| LOC110501994 | hnmt | coding | upstream | 387924 | 47086871 ~ 47103828 (-) |
| trpm2 | LOC106582587 | coding | upstream | 471456 | 47170403 ~ 47260466 (-) |
| cfap65 | cfap65 | coding | upstream | 778681 | 47476398 ~ 47553609 (-) |
| G1816332 | NA | non-coding | downstream | 157893 | 46538391 ~ 46538623 (-) |
| G1816189 | NA | non-coding | downstream | 202723 | 46492827 ~ 46493793 (-) |
| G1816180 | NA | non-coding | downstream | 209924 | 46486373 ~ 46486592 (-) |
| G1816153 | NA | non-coding | downstream | 278530 | 46417535 ~ 46417986 (-) |
| G1816143 | NA | non-coding | downstream | 286003 | 46410245 ~ 46410513 (-) |
| G1816433 | NA | non-coding | upstream | 12020 | 46710967 ~ 46713006 (-) |
| G1816440 | LOC106582580 | non-coding | upstream | 27348 | 46726295 ~ 46729079 (-) |
| G1816441 | NA | non-coding | upstream | 30759 | 46729706 ~ 46729953 (-) |
| G1816442 | NA | non-coding | upstream | 31084 | 46730031 ~ 46730260 (-) |
| G1816443 | NA | non-coding | upstream | 31656 | 46730603 ~ 46730830 (-) |
| G1815615 | LOC106582489 | other | downstream | 855534 | 45838750 ~ 45840982 (-) |
| G1814480 | NA | other | downstream | 2022628 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 2143096 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 4018756 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 4091496 | 42603998 ~ 42605768 (-) |
| G1816841 | NA | other | upstream | 526604 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 702175 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 772347 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 1363102 | 48057851 ~ 48064453 (-) |
| G1817668 | NA | other | upstream | 1569840 | 48268787 ~ 48291496 (-) |
