XLOC_037297


Basic Information

Item Value
gene id XLOC_037297
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34970843 ~ 34973324 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075166
TCCTCTTGAGGGATCTCTTCCAGCAAAGTGacgttaaaaacatttttgaagttTTCAATGAAACGCAAGTCAGAAGGGAATCGTACCTGTTTGGAAAGACACAACAAACCAATCAAGATTTTAAACTTCCCACTATGGACACCAGTCCTGTTCCTGCTCCAAGTTCCAGTACTGCTTTATCCAGAAGTTCAACCTGATCTCGTTGTTTCTCCAAATACCGACAGAGAGCCACAGCCTGTGTAGAATTATACATGCAGTCTGTGCAAACACCAAGATGACGGCACCAAAAGAGTCCAGGGATTCCCGGATGCTGACCTCCTGCCCAGTAAAGAAAAAGGTCTCATTGCCTAGGGAATAGAAGACACTGGGCTCCCAGGCATTACGTCTGTTCAGTGCCTCCTTCTGCATGTCTTTAGCCTCCTGATCTTCTGAAAAAGAGCATGGGTAAAAAAATATCATTGTAAACACTGTTTGCTGAACAATATGCACCTGCACACAatacaattcaaataaaataatgcagGTTTGTTGAAAATATAACACAAAAAATGAACGCTAACACTTTAGTTTGTGCTATTtgtcactattaactagtgg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075166 True 597 lncRNA 0.41 3 34970843 34973324

Neighbor

gene id symbol gene type direction distance location
XLOC_037296 CR936415.1 coding upstream 1276 34969450 ~ 34969567 (+)
XLOC_037295 tfdp1a coding upstream 2414 34950942 ~ 34968429 (+)
XLOC_037294 BX601644.6 coding upstream 142745 34822849 ~ 34828098 (+)
XLOC_037293 BX601644.1 coding upstream 179956 34790750 ~ 34790887 (+)
XLOC_037292 shox coding upstream 323148 34641237 ~ 34647695 (+)
XLOC_037298 jam2b coding downstream 22921 34996245 ~ 35010396 (+)
XLOC_037299 gabpa coding downstream 41189 35014513 ~ 35030107 (+)
XLOC_037300 si:dkey-192g7.3 coding downstream 104222 35077546 ~ 35081996 (+)
XLOC_037301 NA coding downstream 187320 35160644 ~ 35167934 (+)
XLOC_037302 CU074387.1 coding downstream 455878 35429202 ~ 35429316 (+)
XLOC_037289 NA non-coding upstream 579690 34390451 ~ 34391153 (+)
XLOC_037287 NA non-coding upstream 592511 34370860 ~ 34378332 (+)
XLOC_037307 NA non-coding downstream 1014520 35987844 ~ 36102672 (+)
XLOC_037308 NA non-coding downstream 1151429 36124753 ~ 36177421 (+)
XLOC_037310 NA non-coding downstream 1797340 36770664 ~ 36775514 (+)

Expression


Co-expression Network