G1816492


Basic Information

Item Value
gene id G1816492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 46824865 ~ 46825473 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2078148
CTAGCAAGACCATCCAGAcaacccagaccatccagacaaaaaaacatccacactatccagacaacccagaccatccagacaaACCAAAACATCCAGAACATCCTTACCATCCAGATTACGCAAACCATAGAGACTattcagaccatccagactaccccaACCATCCAGAATAAGCATACATTCAacactacccaaaccatccagaccattcagactatccagactaccaaaaccatccagactatccagactaccAAACCATCCGGACCATCTATTCTATGCAGACCATCCAGACtgtccagactacccaaaccatagaGGCTATtaagaccatccagactaccaaaAACCATCCAGAATGAGCAGACATtgcagactacccaaaccatcctaACTATCCAGACAATCCAAACCATCCAGAATGAGCAGACATtgcagactacccaaaccatccagactattCAGACAAACCAAAACATCCAGAACATCCGTACAGCCGTATCAAACCCAAATTATCCAGACAATTCAGACTACCTGAACCATCCAGACTACCTGaaccatccagactatccagaccATACAGACAAACCAAAACATCTAGAACATCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2078148 True 609 lncRNA 0.45 1 46824865 46825473

Neighbor

gene id symbol gene type direction distance location
ints6 LOC106582497 coding downstream 667893 46119388 ~ 46156972 (-)
LOC118943596 NA coding downstream 796359 46011115 ~ 46028506 (-)
LOC110501932 LOC106582487 coding downstream 1098471 45702953 ~ 45726394 (-)
LOC110501943 NA coding downstream 1237153 45582551 ~ 45587712 (-)
LOC110501933 LOC106582484 coding downstream 1245959 45550854 ~ 45578906 (-)
spopla spopl coding upstream 44358 46869775 ~ 46974132 (-)
LOC110501995 hnmt coding upstream 216752 47042225 ~ 47061327 (-)
LOC110501994 hnmt coding upstream 261398 47086871 ~ 47103828 (-)
trpm2 LOC106582587 coding upstream 344930 47170403 ~ 47260466 (-)
cfap65 cfap65 coding upstream 652155 47476398 ~ 47553609 (-)
G1816474 NA non-coding downstream 2083 46778259 ~ 46822782 (-)
G1816472 NA non-coding downstream 51771 46772790 ~ 46773094 (-)
G1816471 LOC101063024 non-coding downstream 53383 46767078 ~ 46771482 (-)
G1816454 NA non-coding downstream 80645 46743784 ~ 46744220 (-)
G1816451 NA non-coding downstream 84242 46740410 ~ 46740623 (-)
G1816525 NA non-coding upstream 16290 46841763 ~ 46842095 (-)
G1816527 NA non-coding upstream 21188 46846661 ~ 46847882 (-)
G1816624 NA non-coding upstream 55432 46880905 ~ 46886278 (-)
G1816648 NA non-coding upstream 150723 46976196 ~ 46976456 (-)
G1815615 LOC106582489 other downstream 983883 45838750 ~ 45840982 (-)
G1814480 NA other downstream 2150977 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 2271445 44473683 ~ 44553607 (-)
G1812404 NA other downstream 4147105 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 4219845 42603998 ~ 42605768 (-)
G1816841 NA other upstream 400078 47225551 ~ 47226646 (-)
G1816929 NA other upstream 575649 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 645821 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 1236576 48057851 ~ 48064453 (-)
G1817668 NA other upstream 1443314 48268787 ~ 48291496 (-)

Expression


Co-expression Network