G1816675


Basic Information

Item Value
gene id G1816675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 47016526 ~ 47018260 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2078360
ggatgtctgaccctaactgggctcaggggcggtcctgtgatttagttcaaatcaaaagggaattgtatttttcttcattaaacaccaaaaacacctactactacaacacagtgtcacacctgtAACACCTACTATTAAAACATAGTGTCACACCaaaaacacctactactacaacacagtgtcacaccaaaaacacctactactacaacacagtgtcacaccagatacacctactattacaacacagtgtaacaccagatacacctactactacaacacagtggcaaaccagatacacctactactacaacacagtggcacaccagatacacctactattacaacacagtgtcacaccagatacacctactattacaacacagtgtcacaccaaaaacaactactaataaaacacAGTGTCACAACaaaaacacctactactacaacacagtgtcacaccagatacacttactactacaacacagtgtcacaccagatacacctactaggacaacacagtgtcacaccaaaaacacctactactacaacacagtggcaCACCAGATATACCTATTACTATAATACAGTGTCACACCAAAAACACCTACTACTATAACACAGtgacacaccagatacacctactattacaacacagtgtcacaccaaaaACACCTACTACTATAACACAGtgacacaccagatacacctacaactacaacacagtgtcacacctgatacacctactattacaacatagtgtcacaccaaaaacacctactactacaacacagtggcacaccagatacacctactattacaacacagtgtcacaccaaatACACCtgctattacaacacagtgtcacaccagatacacctactaggacaacacagtgtcacaccagatacacctactactacaacacagtggcacaccagatacacctactattacaacacagtgtcacaccagatacacctactaggacaacacagtgtcacaccagatacacctactactacaacacagtggcacaccagatacacctactattacaacacagtgtcacaccagatacacctactattacaacacagtgtcacaccaaaaacacctactactacaacacagtgtccaccaaaaacacctactactacaacacagtggcacaccagatacacctacaattacaacacagtgtcacacctgatacacctactactacaacacagtgtcacaccagatacacctactactacaacacagtgtcacacctgatacacctactattacaacacggtgtcacatcagatacacctactactacaacacagtgtcacaccagatacacctaatattacaacacggtgtcacaccagatacccctactattacaacacggtgtcaccccagatacatctactattacaacacggtgtcacactaataacacctactactacaacacagtggcacaccagatacacctactattacaacacagtgtcacaccagatacacttactactacaacacagtggcacaccagatacacctactattacaacacagtgtcacaccagatacacctactaggacaacacagtgtcacaccagatacacctactactacaacacagtggcacaccagatacacctactattacaacacagtgtcacaccagatacacctactattacaacacagtgtcacaccaaaaacacctactactac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2078360 True 1735 lncRNA 0.42 1 47016526 47018260

Neighbor

gene id symbol gene type direction distance location
spopla spopl coding downstream 42394 46869775 ~ 46974132 (-)
ints6 LOC106582497 coding downstream 859554 46119388 ~ 46156972 (-)
LOC118943596 NA coding downstream 988020 46011115 ~ 46028506 (-)
LOC110501932 LOC106582487 coding downstream 1290132 45702953 ~ 45726394 (-)
LOC110501943 NA coding downstream 1428814 45582551 ~ 45587712 (-)
LOC110501995 hnmt coding upstream 23965 47042225 ~ 47061327 (-)
LOC110501994 hnmt coding upstream 68611 47086871 ~ 47103828 (-)
trpm2 LOC106582587 coding upstream 152143 47170403 ~ 47260466 (-)
cfap65 cfap65 coding upstream 459368 47476398 ~ 47553609 (-)
LOC110501961 LOC106582505 coding upstream 610620 47628880 ~ 47635640 (-)
G1816660 NA non-coding downstream 21522 46994708 ~ 46995004 (-)
G1816656 NA non-coding downstream 27697 46988446 ~ 46988829 (-)
G1816648 NA non-coding downstream 40070 46976196 ~ 46976456 (-)
G1816624 NA non-coding downstream 130248 46880905 ~ 46886278 (-)
G1816679 NA non-coding upstream 2854 47021114 ~ 47022821 (-)
G1816691 NA non-coding upstream 19055 47037315 ~ 47038165 (-)
G1816692 NA non-coding upstream 20234 47038494 ~ 47038755 (-)
G1816735 NA non-coding upstream 67175 47085435 ~ 47085923 (-)
G1816770 LOC106583892 non-coding upstream 92285 47110545 ~ 47111662 (-)
G1815615 LOC106582489 other downstream 1175544 45838750 ~ 45840982 (-)
G1814480 NA other downstream 2342638 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 2463106 44473683 ~ 44553607 (-)
G1812404 NA other downstream 4338766 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 4411506 42603998 ~ 42605768 (-)
G1816841 NA other upstream 207291 47225551 ~ 47226646 (-)
G1816929 NA other upstream 382862 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 453034 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 1043789 48057851 ~ 48064453 (-)
G1817668 NA other upstream 1250527 48268787 ~ 48291496 (-)

Expression


Co-expression Network