G1816691


Basic Information

Item Value
gene id G1816691
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 47037315 ~ 47038165 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2078376
tggccaggtcgatgaagacggctgcacagtactgtcttttatcgatggcggttatgatattgtttagtaccttgagcgtggctgaggtgcacccgtgaccggctcggaaaccagattgcacagcggagaaggtacggtgggattcgagatggtcagtgacctgtttgttgacttggctttcgaagaccttaaataggcagggcaggatggatataggtctgtaacagtttgggtccagggtgtctccccctttgaagagggggatgactgcggcagctttccaatccttggggatctcagacgatatgaaagagaggttgaacgggctggtaataggggttgcgacaatggcggcggatagtttcagaaatagagggtccagattgtcaagcccagctgatttgtacgggtccaggttttgcagctctttcagaacatctgctatctggatttgggtaaaggagaacctggagaagcttgggcgagtagctgcgggggggcggagctgttggccaaggttggagtagccaggaggaaggcatggccagccgttgacaAATATTTGTTgtagttttcgataatcatggatttatcggtggcgaccgtgttacctagcctaagtgcagtgggcagctgggaggaggtgctcttgttctccatggactttacagtgtcccagaactttttggagttagagctacaggatgcaaatttctgcctgaagaagctggccttggctttcctgactgactgcgtgtattggttcctgacttccctgaacagttgcatatcgcggggactattctatgctattgcagtccgccacaggatgtttttgtgctggtcgaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2078376 True 851 lncRNA 0.51 1 47037315 47038165

Neighbor

gene id symbol gene type direction distance location
spopla spopl coding downstream 63183 46869775 ~ 46974132 (-)
ints6 LOC106582497 coding downstream 880343 46119388 ~ 46156972 (-)
LOC118943596 NA coding downstream 1008809 46011115 ~ 46028506 (-)
LOC110501932 LOC106582487 coding downstream 1310921 45702953 ~ 45726394 (-)
LOC110501943 NA coding downstream 1449603 45582551 ~ 45587712 (-)
LOC110501995 hnmt coding upstream 4060 47042225 ~ 47061327 (-)
LOC110501994 hnmt coding upstream 48706 47086871 ~ 47103828 (-)
trpm2 LOC106582587 coding upstream 132238 47170403 ~ 47260466 (-)
cfap65 cfap65 coding upstream 439463 47476398 ~ 47553609 (-)
LOC110501961 LOC106582505 coding upstream 590715 47628880 ~ 47635640 (-)
G1816679 NA non-coding downstream 14494 47021114 ~ 47022821 (-)
G1816675 NA non-coding downstream 19055 47016526 ~ 47018260 (-)
G1816660 NA non-coding downstream 42311 46994708 ~ 46995004 (-)
G1816656 NA non-coding downstream 48486 46988446 ~ 46988829 (-)
G1816648 NA non-coding downstream 60859 46976196 ~ 46976456 (-)
G1816692 NA non-coding upstream 329 47038494 ~ 47038755 (-)
G1816735 NA non-coding upstream 47270 47085435 ~ 47085923 (-)
G1816770 LOC106583892 non-coding upstream 72380 47110545 ~ 47111662 (-)
G1816774 NA non-coding upstream 76576 47114741 ~ 47114943 (-)
G1816786 NA non-coding upstream 80286 47118451 ~ 47168499 (-)
G1815615 LOC106582489 other downstream 1196333 45838750 ~ 45840982 (-)
G1814480 NA other downstream 2363427 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 2483895 44473683 ~ 44553607 (-)
G1812404 NA other downstream 4359555 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 4432295 42603998 ~ 42605768 (-)
G1816841 NA other upstream 187386 47225551 ~ 47226646 (-)
G1816929 NA other upstream 362957 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 433129 47471294 ~ 47473384 (-)
LOC110501953 ihh other upstream 1023884 48057851 ~ 48064453 (-)
G1817668 NA other upstream 1230622 48268787 ~ 48291496 (-)

Expression


Co-expression Network