Gene
RNA
| Item | Value |
|---|---|
| gene id | G1817329 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 47549821 ~ 47551731 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2079271 | True | 203 | lncRNA | 0.37 | 2 | 47549821 | 47551731 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trpm2 | LOC106582587 | coding | downstream | 289355 | 47170403 ~ 47260466 (-) |
| LOC110501994 | hnmt | coding | downstream | 445993 | 47086871 ~ 47103828 (-) |
| LOC110501995 | hnmt | coding | downstream | 488494 | 47042225 ~ 47061327 (-) |
| spopla | spopl | coding | downstream | 575689 | 46869775 ~ 46974132 (-) |
| ints6 | LOC106582497 | coding | downstream | 1392849 | 46119388 ~ 46156972 (-) |
| LOC110501961 | LOC106582505 | coding | upstream | 77149 | 47628880 ~ 47635640 (-) |
| ptprna | LOC106582506 | coding | upstream | 181488 | 47733219 ~ 47834254 (-) |
| tmem198a | LOC106582514 | coding | upstream | 345326 | 47897057 ~ 47972131 (-) |
| LOC110501953 | ihh | coding | upstream | 506120 | 48057851 ~ 48064453 (-) |
| LOC110501956 | itgav | coding | upstream | 588030 | 48139761 ~ 48220042 (-) |
| G1817319 | NA | non-coding | downstream | 22528 | 47520314 ~ 47527293 (-) |
| G1817320 | NA | non-coding | downstream | 24467 | 47525121 ~ 47525354 (-) |
| G1817318 | NA | non-coding | downstream | 28238 | 47518976 ~ 47521583 (-) |
| G1817290 | NA | non-coding | downstream | 65381 | 47483730 ~ 47484440 (-) |
| cfap65 | cfap65 | non-coding | downstream | 70373 | 47476398 ~ 47553609 (-) |
| G1817341 | NA | non-coding | upstream | 25258 | 47576989 ~ 47577229 (-) |
| G1817352 | NA | non-coding | upstream | 62485 | 47614216 ~ 47614419 (-) |
| G1817353 | NA | non-coding | upstream | 63451 | 47615182 ~ 47615985 (-) |
| G1817368 | NA | non-coding | upstream | 92639 | 47644370 ~ 47645779 (-) |
| G1817376 | NA | non-coding | upstream | 125545 | 47677276 ~ 47677970 (-) |
| G1817287 | LOC106582526 | other | downstream | 76437 | 47471294 ~ 47473384 (-) |
| G1816929 | NA | other | downstream | 147774 | 47400985 ~ 47402047 (-) |
| G1816841 | NA | other | downstream | 323175 | 47225551 ~ 47226646 (-) |
| G1815615 | LOC106582489 | other | downstream | 1708839 | 45838750 ~ 45840982 (-) |
| G1814480 | NA | other | downstream | 2875933 | 44673447 ~ 44673888 (-) |
| G1817668 | NA | other | upstream | 717056 | 48268787 ~ 48291496 (-) |
| G1817836 | NA | other | upstream | 907295 | 48459026 ~ 48460040 (-) |
| G1817968 | NA | other | upstream | 917867 | 48469598 ~ 48470035 (-) |
| G1818059 | NA | other | upstream | 1075633 | 48627364 ~ 48627846 (-) |
