G1817353


Basic Information

Item Value
gene id G1817353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 47615182 ~ 47615985 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2079300
GTATTTATGTTACTGAATAGGTTCAACTTGAGTGTTCAAAGAAATAGTTTGCAACTTGAAATATAGGGTTCATATATAACAGTTGGCATTGAATCATATATTTGGTTTCAACATATTGAGAAAACTTCATTTATACCagtcaaattatttttttttttaggatgatacagtctttttttgtgtgtgtaatcAATCTCCACGGCCTCGCCAACAAACACACCCCTTACTACACTCCAGCCTGGAGTAGGATATGGCCACCCATaaacctcaacacacacactattgttctgtttctctctgtcttcaaCCAGTGAAATAATTCATCTTTAATTCATATTTTTCCCCTCATTTAACCAATACCCTCTCTATCCCCTGAGACCCAAATTCATTACATAGGCACCTTATTTGTCTTTTAGTTGATCTCATCATTAAACTCTTACACTAGGTAATAAACCGTCCCTCATGTTGACCCTAATAAACCATCCCTCATGTTGACCCTAATAAACCATCCCTCGTGTTGACCCTAATAAACCATCCCTCATGTTGACCGTAATAAACCCTCCCTCGTGTTGACCCTAATAAACCATCCCTCGTGTTGACCCTAATAAACCATCCCTCGTGTTGACCCTAATAAACCATCCCTCATGTTGACCCTAATAAACCATCCCTCGTGTTGACCCTAATAAACCATCCCTCATGCTGACACGTAATAAACCATCCCTCATGTTGACCCTAATAAACCATCCCTTGTGTTGACTGTAATAAACCATCCCTCATGTTGACTGTAATAAACCATCCCTCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2079300 True 804 lncRNA 0.39 1 47615182 47615985

Neighbor

gene id symbol gene type direction distance location
cfap65 cfap65 coding downstream 61573 47476398 ~ 47553609 (-)
trpm2 LOC106582587 coding downstream 354716 47170403 ~ 47260466 (-)
LOC110501994 hnmt coding downstream 511354 47086871 ~ 47103828 (-)
LOC110501995 hnmt coding downstream 553855 47042225 ~ 47061327 (-)
spopla spopl coding downstream 641050 46869775 ~ 46974132 (-)
LOC110501961 LOC106582505 coding upstream 12895 47628880 ~ 47635640 (-)
ptprna LOC106582506 coding upstream 117234 47733219 ~ 47834254 (-)
tmem198a LOC106582514 coding upstream 281072 47897057 ~ 47972131 (-)
LOC110501953 ihh coding upstream 441866 48057851 ~ 48064453 (-)
LOC110501956 itgav coding upstream 523776 48139761 ~ 48220042 (-)
G1817352 NA non-coding downstream 763 47614216 ~ 47614419 (-)
G1817341 NA non-coding downstream 37953 47576989 ~ 47577229 (-)
G1817329 NA non-coding downstream 63451 47549821 ~ 47551731 (-)
G1817319 NA non-coding downstream 87889 47520314 ~ 47527293 (-)
G1817320 NA non-coding downstream 89828 47525121 ~ 47525354 (-)
G1817368 NA non-coding upstream 28385 47644370 ~ 47645779 (-)
G1817376 NA non-coding upstream 61291 47677276 ~ 47677970 (-)
G1817380 NA non-coding upstream 67492 47683477 ~ 47712089 (-)
G1817406 NA non-coding upstream 113372 47729357 ~ 47730208 (-)
G1817416 NA non-coding upstream 134708 47750693 ~ 47751260 (-)
G1817287 LOC106582526 other downstream 141798 47471294 ~ 47473384 (-)
G1816929 NA other downstream 213135 47400985 ~ 47402047 (-)
G1816841 NA other downstream 388536 47225551 ~ 47226646 (-)
G1815615 LOC106582489 other downstream 1774200 45838750 ~ 45840982 (-)
G1814480 NA other downstream 2941294 44673447 ~ 44673888 (-)
G1817668 NA other upstream 652802 48268787 ~ 48291496 (-)
G1817836 NA other upstream 843041 48459026 ~ 48460040 (-)
G1817968 NA other upstream 853613 48469598 ~ 48470035 (-)
G1818059 NA other upstream 1011379 48627364 ~ 48627846 (-)

Expression


Co-expression Network