G1817740



Basic Information


Item Value
gene id G1817740
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 48378776 ~ 48379312 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2079815
CCCCTAAAACTATCCTTATTGAGGTGTCATTACACCCCTAAAACTATCCTTATTGAGGTGTCATTACACCTCTAAAACTATCCTTATTGAGGTGTCATTACACCTCTAAAACTATCCTTATTGAGGTGTCATTACACCCCTAAAACTATCCTTATTGAGGTGTCATTACACCTCTAAAACTATCCTTATTGAGGTGTCATTACACCTCTAAAAAACTATCAGCAAGTGTCAGCAAGTGTCAACTTTCTTTGACCAAGAAAAATAAGAAAGTAGACATTGGGCAGCCTTGTTTAATTCAGTATAATGTCGAATCTCTGTGGAAGTTCCGTGGGATGATTTAACAgagctgttactgttactgtgaaGTGTTTTAATTACAAATATtgaccaaaccccccccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2079815 True 401 lncRNA 0.38 2 48378776 48379312

Neighbor


gene id symbol gene type direction distance location
LOC110501956 itgav coding downstream 158734 48139761 ~ 48220042 (-)
LOC110501953 ihh coding downstream 314323 48057851 ~ 48064453 (-)
tmem198a LOC106582514 coding downstream 406645 47897057 ~ 47972131 (-)
ptprna LOC106582506 coding downstream 544522 47733219 ~ 47834254 (-)
LOC110501961 LOC106582505 coding downstream 743136 47628880 ~ 47635640 (-)
LOC110502188 LOC106582504 coding upstream 126133 48505445 ~ 48645921 (-)
LOC118943644 NA coding upstream 582900 48962212 ~ 48964633 (-)
LOC118943599 NA coding upstream 1090790 49470102 ~ 49480960 (-)
prkag3b LOC106592041 coding upstream 1743576 50122888 ~ 50243945 (-)
si:ch211-67e16.4 LOC106582542 coding upstream 2080782 50460094 ~ 50465680 (-)
G1817727 NA non-coding downstream 11415 48367151 ~ 48367361 (-)
G1817714 LOC106581772 non-coding downstream 26515 48352022 ~ 48352261 (-)
G1817705 NA non-coding downstream 36241 48340040 ~ 48342535 (-)
G1817701 NA non-coding downstream 50636 48326886 ~ 48328140 (-)
G1817688 NA non-coding downstream 68314 48308870 ~ 48310462 (-)
G1817765 NA non-coding upstream 13003 48392315 ~ 48396735 (-)
G1817773 NA non-coding upstream 31073 48410385 ~ 48410666 (-)
G1817786 NA non-coding upstream 40415 48419727 ~ 48419927 (-)
G1817813 NA non-coding upstream 60711 48440023 ~ 48440260 (-)
G1817830 NA non-coding upstream 75918 48455230 ~ 48455431 (-)
G1817668 NA other downstream 87280 48268787 ~ 48291496 (-)
G1817287 LOC106582526 other downstream 905392 47471294 ~ 47473384 (-)
G1816929 NA other downstream 976729 47400985 ~ 47402047 (-)
G1816841 NA other downstream 1152130 47225551 ~ 47226646 (-)
G1817836 NA other upstream 79714 48459026 ~ 48460040 (-)
G1817968 NA other upstream 90286 48469598 ~ 48470035 (-)
G1818059 NA other upstream 248052 48627364 ~ 48627846 (-)
G1818393 NA other upstream 746202 49125514 ~ 49126117 (-)
G1818417 NA other upstream 786439 49165751 ~ 49166367 (-)

Expression



Co-expression Network