Gene
RNA
| Item | Value |
|---|---|
| gene id | G1817765 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48392315 ~ 48396735 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: mucin-20-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2079856 | True | 1005 | lncRNA | 0.39 | 6 | 48392315 | 48396735 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501956 | itgav | coding | downstream | 172273 | 48139761 ~ 48220042 (-) |
| LOC110501953 | ihh | coding | downstream | 327862 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 420184 | 47897057 ~ 47972131 (-) |
| ptprna | LOC106582506 | coding | downstream | 558061 | 47733219 ~ 47834254 (-) |
| LOC110501961 | LOC106582505 | coding | downstream | 756675 | 47628880 ~ 47635640 (-) |
| LOC110502188 | LOC106582504 | coding | upstream | 108710 | 48505445 ~ 48645921 (-) |
| LOC118943644 | NA | coding | upstream | 565477 | 48962212 ~ 48964633 (-) |
| LOC118943599 | NA | coding | upstream | 1073367 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 1726153 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 2063359 | 50460094 ~ 50465680 (-) |
| G1817740 | NA | non-coding | downstream | 13003 | 48378776 ~ 48379312 (-) |
| G1817727 | NA | non-coding | downstream | 24954 | 48367151 ~ 48367361 (-) |
| G1817714 | LOC106581772 | non-coding | downstream | 40054 | 48352022 ~ 48352261 (-) |
| G1817705 | NA | non-coding | downstream | 49780 | 48340040 ~ 48342535 (-) |
| G1817701 | NA | non-coding | downstream | 64175 | 48326886 ~ 48328140 (-) |
| G1817773 | NA | non-coding | upstream | 13650 | 48410385 ~ 48410666 (-) |
| G1817786 | NA | non-coding | upstream | 22992 | 48419727 ~ 48419927 (-) |
| G1817813 | NA | non-coding | upstream | 43288 | 48440023 ~ 48440260 (-) |
| G1817830 | NA | non-coding | upstream | 58495 | 48455230 ~ 48455431 (-) |
| G1817839 | NA | non-coding | upstream | 64251 | 48460986 ~ 48461265 (-) |
| G1817668 | NA | other | downstream | 100819 | 48268787 ~ 48291496 (-) |
| G1817287 | LOC106582526 | other | downstream | 918931 | 47471294 ~ 47473384 (-) |
| G1816929 | NA | other | downstream | 990268 | 47400985 ~ 47402047 (-) |
| G1816841 | NA | other | downstream | 1165669 | 47225551 ~ 47226646 (-) |
| G1817836 | NA | other | upstream | 62291 | 48459026 ~ 48460040 (-) |
| G1817968 | NA | other | upstream | 72863 | 48469598 ~ 48470035 (-) |
| G1818059 | NA | other | upstream | 230629 | 48627364 ~ 48627846 (-) |
| G1818393 | NA | other | upstream | 728779 | 49125514 ~ 49126117 (-) |
| G1818417 | NA | other | upstream | 769016 | 49165751 ~ 49166367 (-) |
