Gene
RNA
| Item | Value |
|---|---|
| gene id | G1817773 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48410385 ~ 48410666 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2079865 | True | 282 | lncRNA | 0.42 | 1 | 48410385 | 48410666 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501956 | itgav | coding | downstream | 190343 | 48139761 ~ 48220042 (-) |
| LOC110501953 | ihh | coding | downstream | 345932 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 438254 | 47897057 ~ 47972131 (-) |
| ptprna | LOC106582506 | coding | downstream | 576131 | 47733219 ~ 47834254 (-) |
| LOC110501961 | LOC106582505 | coding | downstream | 774745 | 47628880 ~ 47635640 (-) |
| LOC110502188 | LOC106582504 | coding | upstream | 94779 | 48505445 ~ 48645921 (-) |
| LOC118943644 | NA | coding | upstream | 551546 | 48962212 ~ 48964633 (-) |
| LOC118943599 | NA | coding | upstream | 1059436 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 1712222 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 2049428 | 50460094 ~ 50465680 (-) |
| G1817765 | NA | non-coding | downstream | 13650 | 48392315 ~ 48396735 (-) |
| G1817740 | NA | non-coding | downstream | 31073 | 48378776 ~ 48379312 (-) |
| G1817727 | NA | non-coding | downstream | 43024 | 48367151 ~ 48367361 (-) |
| G1817714 | LOC106581772 | non-coding | downstream | 58124 | 48352022 ~ 48352261 (-) |
| G1817705 | NA | non-coding | downstream | 67850 | 48340040 ~ 48342535 (-) |
| G1817786 | NA | non-coding | upstream | 9061 | 48419727 ~ 48419927 (-) |
| G1817813 | NA | non-coding | upstream | 29357 | 48440023 ~ 48440260 (-) |
| G1817830 | NA | non-coding | upstream | 44564 | 48455230 ~ 48455431 (-) |
| G1817839 | NA | non-coding | upstream | 50320 | 48460986 ~ 48461265 (-) |
| G1817668 | NA | other | downstream | 118889 | 48268787 ~ 48291496 (-) |
| G1817287 | LOC106582526 | other | downstream | 937001 | 47471294 ~ 47473384 (-) |
| G1816929 | NA | other | downstream | 1008338 | 47400985 ~ 47402047 (-) |
| G1816841 | NA | other | downstream | 1183739 | 47225551 ~ 47226646 (-) |
| G1817836 | NA | other | upstream | 48360 | 48459026 ~ 48460040 (-) |
| G1817968 | NA | other | upstream | 58932 | 48469598 ~ 48470035 (-) |
| G1818059 | NA | other | upstream | 216698 | 48627364 ~ 48627846 (-) |
| G1818393 | NA | other | upstream | 714848 | 49125514 ~ 49126117 (-) |
| G1818417 | NA | other | upstream | 755085 | 49165751 ~ 49166367 (-) |
