G1818034



Basic Information


Item Value
gene id G1818034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 48591411 ~ 48592271 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2080171
TAGTTGCTGTGGGACGTTATAGCCAGGTGTTCTCTGTACAGgacagtggtgttagatgttctctgtaatgTTCAGgacagtggtgttagatgttctctgtaatgTTTAGgacagtggtgttagatgttctctgtaatgTACAGgacagtggtgttagatgttctctgtaatgTGCAGgacagtggtgttagatgttctctgtaatgTTCAGgacagtggtgttagatgttctctgtaatgTACAGgacagtggtgttagatgttctctgtaatgTGCAGgacagtggtgttagatgttctctgtaatgTGCAGgacagtggtgttagatgttctctgtaatgTTCAGgacagtggtgttagatgttctctgtaatgTACAGgacagtgatgttagatgttctctgtaatgTTCAGgacagtggtgttagatgttctctgtaatgTACAGgacagtggtgttagatgttctctgtaatgTACAGgacagtggtgttagatgttctctgtaatgTTCAGgacagtggtgttagatgttctctgtaatgTTCAGgacagtggtgttagatgttctctgtaatgTACAGgacagtggtgttagatgttctctgtaatgTACAGgacagtggtgttagatgttctctgtaatgTACAGgacagtggtgttagatgttctctgtaatgTA

Function


NR:

description
PREDICTED: uncharacterized protein FLJ40521-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2080171 True 684 lncRNA 0.42 2 48591411 48592271

Neighbor


gene id symbol gene type direction distance location
LOC110501956 itgav coding downstream 371369 48139761 ~ 48220042 (-)
LOC110501953 ihh coding downstream 526958 48057851 ~ 48064453 (-)
tmem198a LOC106582514 coding downstream 619280 47897057 ~ 47972131 (-)
ptprna LOC106582506 coding downstream 757157 47733219 ~ 47834254 (-)
LOC110501961 LOC106582505 coding downstream 955771 47628880 ~ 47635640 (-)
LOC118943644 NA coding upstream 369941 48962212 ~ 48964633 (-)
LOC118943599 NA coding upstream 877831 49470102 ~ 49480960 (-)
prkag3b LOC106592041 coding upstream 1530617 50122888 ~ 50243945 (-)
si:ch211-67e16.4 LOC106582542 coding upstream 1867823 50460094 ~ 50465680 (-)
si:ch211-67e16.3 LOC106582540 coding upstream 1879476 50471747 ~ 50484670 (-)
G1818033 NA non-coding downstream 2305 48587700 ~ 48589106 (-)
G1818030 NA non-coding downstream 8441 48582562 ~ 48582970 (-)
LOC110502188 LOC106582504 non-coding downstream 47682 48505445 ~ 48645921 (-)
G1817839 NA non-coding downstream 130146 48460986 ~ 48461265 (-)
G1817830 NA non-coding downstream 135980 48455230 ~ 48455431 (-)
G1818074 NA non-coding upstream 63052 48655323 ~ 48655607 (-)
G1818076 NA non-coding upstream 65515 48657786 ~ 48658031 (-)
G1818084 NA non-coding upstream 84237 48676508 ~ 48676734 (-)
G1818085 NA non-coding upstream 87647 48679918 ~ 48680166 (-)
G1818106 NA non-coding upstream 153227 48745498 ~ 48745793 (-)
G1817968 NA other downstream 121376 48469598 ~ 48470035 (-)
G1817836 NA other downstream 131371 48459026 ~ 48460040 (-)
G1817668 NA other downstream 299915 48268787 ~ 48291496 (-)
G1817287 LOC106582526 other downstream 1118027 47471294 ~ 47473384 (-)
G1818059 NA other upstream 35093 48627364 ~ 48627846 (-)
G1818393 NA other upstream 533243 49125514 ~ 49126117 (-)
G1818417 NA other upstream 573480 49165751 ~ 49166367 (-)
G1818802 NA other upstream 1125361 49717632 ~ 49719378 (-)
G1819189 NA other upstream 1617203 50137937 ~ 50219233 (-)

Expression



Co-expression Network