Gene
RNA
| Item | Value |
|---|---|
| gene id | G1818034 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48591411 ~ 48592271 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein FLJ40521-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2080171 | True | 684 | lncRNA | 0.42 | 2 | 48591411 | 48592271 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501956 | itgav | coding | downstream | 371369 | 48139761 ~ 48220042 (-) |
| LOC110501953 | ihh | coding | downstream | 526958 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 619280 | 47897057 ~ 47972131 (-) |
| ptprna | LOC106582506 | coding | downstream | 757157 | 47733219 ~ 47834254 (-) |
| LOC110501961 | LOC106582505 | coding | downstream | 955771 | 47628880 ~ 47635640 (-) |
| LOC118943644 | NA | coding | upstream | 369941 | 48962212 ~ 48964633 (-) |
| LOC118943599 | NA | coding | upstream | 877831 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 1530617 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 1867823 | 50460094 ~ 50465680 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | upstream | 1879476 | 50471747 ~ 50484670 (-) |
| G1818033 | NA | non-coding | downstream | 2305 | 48587700 ~ 48589106 (-) |
| G1818030 | NA | non-coding | downstream | 8441 | 48582562 ~ 48582970 (-) |
| LOC110502188 | LOC106582504 | non-coding | downstream | 47682 | 48505445 ~ 48645921 (-) |
| G1817839 | NA | non-coding | downstream | 130146 | 48460986 ~ 48461265 (-) |
| G1817830 | NA | non-coding | downstream | 135980 | 48455230 ~ 48455431 (-) |
| G1818074 | NA | non-coding | upstream | 63052 | 48655323 ~ 48655607 (-) |
| G1818076 | NA | non-coding | upstream | 65515 | 48657786 ~ 48658031 (-) |
| G1818084 | NA | non-coding | upstream | 84237 | 48676508 ~ 48676734 (-) |
| G1818085 | NA | non-coding | upstream | 87647 | 48679918 ~ 48680166 (-) |
| G1818106 | NA | non-coding | upstream | 153227 | 48745498 ~ 48745793 (-) |
| G1817968 | NA | other | downstream | 121376 | 48469598 ~ 48470035 (-) |
| G1817836 | NA | other | downstream | 131371 | 48459026 ~ 48460040 (-) |
| G1817668 | NA | other | downstream | 299915 | 48268787 ~ 48291496 (-) |
| G1817287 | LOC106582526 | other | downstream | 1118027 | 47471294 ~ 47473384 (-) |
| G1818059 | NA | other | upstream | 35093 | 48627364 ~ 48627846 (-) |
| G1818393 | NA | other | upstream | 533243 | 49125514 ~ 49126117 (-) |
| G1818417 | NA | other | upstream | 573480 | 49165751 ~ 49166367 (-) |
| G1818802 | NA | other | upstream | 1125361 | 49717632 ~ 49719378 (-) |
| G1819189 | NA | other | upstream | 1617203 | 50137937 ~ 50219233 (-) |
