Gene
RNA
| Item | Value |
|---|---|
| gene id | G1818396 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 49143317 ~ 49143584 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC104955046 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2080634 | True | 268 | lncRNA | 0.41 | 1 | 49143317 | 49143584 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943644 | NA | coding | downstream | 178684 | 48962212 ~ 48964633 (-) |
| LOC110502188 | LOC106582504 | coding | downstream | 497396 | 48505445 ~ 48645921 (-) |
| LOC110501956 | itgav | coding | downstream | 923275 | 48139761 ~ 48220042 (-) |
| LOC110501953 | ihh | coding | downstream | 1078864 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 1171186 | 47897057 ~ 47972131 (-) |
| LOC118943599 | NA | coding | upstream | 326518 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 979304 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 1316510 | 50460094 ~ 50465680 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | upstream | 1328163 | 50471747 ~ 50484670 (-) |
| cd28 | LOC100136275 | coding | upstream | 1351483 | 50495067 ~ 50496991 (-) |
| G1818391 | NA | non-coding | downstream | 37954 | 49104823 ~ 49105363 (-) |
| G1818369 | NA | non-coding | downstream | 40895 | 49046582 ~ 49102422 (-) |
| G1818326 | NA | non-coding | downstream | 122111 | 49020386 ~ 49021206 (-) |
| G1818325 | NA | non-coding | downstream | 123139 | 49019943 ~ 49020178 (-) |
| G1818322 | NA | non-coding | downstream | 124380 | 49017069 ~ 49018937 (-) |
| G1818399 | NA | non-coding | upstream | 970 | 49144554 ~ 49145531 (-) |
| G1818415 | NA | non-coding | upstream | 20986 | 49164570 ~ 49165171 (-) |
| G1818422 | NA | non-coding | upstream | 32672 | 49176256 ~ 49176594 (-) |
| G1818436 | NA | non-coding | upstream | 52976 | 49196560 ~ 49197782 (-) |
| G1818446 | NA | non-coding | upstream | 70090 | 49213674 ~ 49213886 (-) |
| G1818393 | NA | other | downstream | 17200 | 49125514 ~ 49126117 (-) |
| G1818059 | NA | other | downstream | 515471 | 48627364 ~ 48627846 (-) |
| G1817968 | NA | other | downstream | 673282 | 48469598 ~ 48470035 (-) |
| G1817836 | NA | other | downstream | 683277 | 48459026 ~ 48460040 (-) |
| G1817668 | NA | other | downstream | 851821 | 48268787 ~ 48291496 (-) |
| G1818417 | NA | other | upstream | 22167 | 49165751 ~ 49166367 (-) |
| G1818802 | NA | other | upstream | 574048 | 49717632 ~ 49719378 (-) |
| G1819189 | NA | other | upstream | 1065890 | 50137937 ~ 50219233 (-) |
| G1819250 | NA | other | upstream | 1158217 | 50301801 ~ 50305038 (-) |
