G1818436


Basic Information

Item Value
gene id G1818436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 49196560 ~ 49197782 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2080686
tctacacCATGCTGTCTCTAGTCCCTACACCATGATGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTATACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCatgctgtctctagtctctacacCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGATGTCTCTAGTCCCTACACCatgctgtctctagtctctacaccatgctgtctctagtctctacaccatgctgtctctactccctacaccatgctgtctctagtctctacacCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGCCTCTATTCCCTAGATAACTAGCTAGTAGAACAAGTCTCTACTTTTGTCAGTCAATAGCCAGCTATAGATAACTAGCTAGTAGAACTAGTCTCTACTGTTGCCAGTCGATAGCCAGctacaaattagctagctaagtagaacTAGTCTCTACTGTTGTCAGTCAATAGCCAGCTATAGATAACTAACTAGTAGAACTAGTCTCTACTGTTGCCAGTCAATAGCCAGCTATAGATAACTAACTA
>TU2080687
CCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTGTACCATGCTGTCTCTAGTCCATACACCATGctgtctctagtctctacacCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGTCTCTAGTCCCTACACCATGCTGCCTCTATTCCCTAGATAACTAGCTAGTAGAACAAGTCTCTACTTTTGTCAGTCAATAGCCAGCTATAGATAACTAGCTAGTAGAACTAGTCTCTACTGTTGCCAGTCGATAGCCAGctacaaattagctagctaagtagaacTAGTCTCTACTGTTGTCAGTCAATAGCCAGCTATAGATAACTAACTAGTAGAACTAGTCTCTACTGTTGCCAGTCAATAGCCAGCTATAGATAACTAACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2080686 False 878 lncRNA 0.48 2 49196560 49197460
TU2080687 True 533 lncRNA 0.46 2 49196560 49197782

Neighbor

gene id symbol gene type direction distance location
LOC118943644 NA coding downstream 231927 48962212 ~ 48964633 (-)
LOC110502188 LOC106582504 coding downstream 550639 48505445 ~ 48645921 (-)
LOC110501956 itgav coding downstream 976518 48139761 ~ 48220042 (-)
LOC110501953 ihh coding downstream 1132107 48057851 ~ 48064453 (-)
tmem198a LOC106582514 coding downstream 1224429 47897057 ~ 47972131 (-)
LOC118943599 NA coding upstream 272320 49470102 ~ 49480960 (-)
prkag3b LOC106592041 coding upstream 925106 50122888 ~ 50243945 (-)
si:ch211-67e16.4 LOC106582542 coding upstream 1262312 50460094 ~ 50465680 (-)
si:ch211-67e16.3 LOC106582540 coding upstream 1273965 50471747 ~ 50484670 (-)
cd28 LOC100136275 coding upstream 1297285 50495067 ~ 50496991 (-)
G1818422 NA non-coding downstream 19966 49176256 ~ 49176594 (-)
G1818415 NA non-coding downstream 31389 49164570 ~ 49165171 (-)
G1818399 NA non-coding downstream 51029 49144554 ~ 49145531 (-)
G1818396 NA non-coding downstream 52976 49143317 ~ 49143584 (-)
G1818391 NA non-coding downstream 91197 49104823 ~ 49105363 (-)
G1818446 NA non-coding upstream 15892 49213674 ~ 49213886 (-)
G1818448 NA non-coding upstream 16389 49214171 ~ 49214378 (-)
G1818474 NA non-coding upstream 37756 49235538 ~ 49235765 (-)
G1818478 NA non-coding upstream 98393 49296175 ~ 49296443 (-)
G1818486 NA non-coding upstream 110003 49307785 ~ 49308096 (-)
G1818417 NA other downstream 30193 49165751 ~ 49166367 (-)
G1818393 NA other downstream 70443 49125514 ~ 49126117 (-)
G1818059 NA other downstream 568714 48627364 ~ 48627846 (-)
G1817968 NA other downstream 726525 48469598 ~ 48470035 (-)
G1817836 NA other downstream 736520 48459026 ~ 48460040 (-)
G1818802 NA other upstream 519850 49717632 ~ 49719378 (-)
G1819189 NA other upstream 1011692 50137937 ~ 50219233 (-)
G1819250 NA other upstream 1104019 50301801 ~ 50305038 (-)

Expression


Co-expression Network