Gene
RNA
| Item | Value |
|---|---|
| gene id | G1818555 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 49404598 ~ 49405120 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2080835 | False | 244 | lncRNA | 0.46 | 3 | 49404598 | 49405120 |
| TU2080836 | True | 337 | lncRNA | 0.44 | 3 | 49404598 | 49405120 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943644 | NA | coding | downstream | 439965 | 48962212 ~ 48964633 (-) |
| LOC110502188 | LOC106582504 | coding | downstream | 758677 | 48505445 ~ 48645921 (-) |
| LOC110501956 | itgav | coding | downstream | 1184556 | 48139761 ~ 48220042 (-) |
| LOC110501953 | ihh | coding | downstream | 1340145 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 1432467 | 47897057 ~ 47972131 (-) |
| LOC118943599 | NA | coding | upstream | 64982 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 717768 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 1054974 | 50460094 ~ 50465680 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | upstream | 1066627 | 50471747 ~ 50484670 (-) |
| cd28 | LOC100136275 | coding | upstream | 1089947 | 50495067 ~ 50496991 (-) |
| G1818550 | NA | non-coding | downstream | 4232 | 49399957 ~ 49400366 (-) |
| G1818542 | NA | non-coding | downstream | 13302 | 49384185 ~ 49391296 (-) |
| G1818543 | NA | non-coding | downstream | 18865 | 49379416 ~ 49385733 (-) |
| G1818528 | NA | non-coding | downstream | 37998 | 49364739 ~ 49366600 (-) |
| G1818519 | NA | non-coding | downstream | 49117 | 49355198 ~ 49355481 (-) |
| G1818559 | NA | non-coding | upstream | 3064 | 49408184 ~ 49408424 (-) |
| G1818640 | NA | non-coding | upstream | 100772 | 49505892 ~ 49506560 (-) |
| G1818647 | NA | non-coding | upstream | 112331 | 49517451 ~ 49518194 (-) |
| G1818677 | NA | non-coding | upstream | 154044 | 49559164 ~ 49559382 (-) |
| G1818685 | NA | non-coding | upstream | 160550 | 49565670 ~ 49566439 (-) |
| G1818417 | NA | other | downstream | 238231 | 49165751 ~ 49166367 (-) |
| G1818393 | NA | other | downstream | 278481 | 49125514 ~ 49126117 (-) |
| G1818059 | NA | other | downstream | 776752 | 48627364 ~ 48627846 (-) |
| G1817968 | NA | other | downstream | 934563 | 48469598 ~ 48470035 (-) |
| G1817836 | NA | other | downstream | 944558 | 48459026 ~ 48460040 (-) |
| G1818802 | NA | other | upstream | 312512 | 49717632 ~ 49719378 (-) |
| G1819189 | NA | other | upstream | 804354 | 50137937 ~ 50219233 (-) |
| G1819250 | NA | other | upstream | 896681 | 50301801 ~ 50305038 (-) |
