Gene
RNA
| Item | Value |
|---|---|
| gene id | G1818647 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 49517451 ~ 49518194 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cysteine-rich and transmembrane domain-containing protein B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2080941 | True | 519 | lncRNA | 0.49 | 2 | 49517451 | 49518194 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943599 | NA | coding | downstream | 36491 | 49470102 ~ 49480960 (-) |
| LOC118943644 | NA | coding | downstream | 552818 | 48962212 ~ 48964633 (-) |
| LOC110502188 | LOC106582504 | coding | downstream | 871530 | 48505445 ~ 48645921 (-) |
| LOC110501956 | itgav | coding | downstream | 1297409 | 48139761 ~ 48220042 (-) |
| LOC110501953 | ihh | coding | downstream | 1452998 | 48057851 ~ 48064453 (-) |
| prkag3b | LOC106592041 | coding | upstream | 604694 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 941900 | 50460094 ~ 50465680 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | upstream | 953553 | 50471747 ~ 50484670 (-) |
| cd28 | LOC100136275 | coding | upstream | 976873 | 50495067 ~ 50496991 (-) |
| LOC118943619 | NA | coding | upstream | 1003810 | 50521227 ~ 50533748 (-) |
| G1818640 | NA | non-coding | downstream | 10891 | 49505892 ~ 49506560 (-) |
| G1818559 | NA | non-coding | downstream | 109027 | 49408184 ~ 49408424 (-) |
| G1818555 | NA | non-coding | downstream | 112331 | 49404598 ~ 49405120 (-) |
| G1818550 | NA | non-coding | downstream | 117085 | 49399957 ~ 49400366 (-) |
| G1818542 | NA | non-coding | downstream | 126155 | 49384185 ~ 49391296 (-) |
| G1818677 | NA | non-coding | upstream | 40970 | 49559164 ~ 49559382 (-) |
| G1818685 | NA | non-coding | upstream | 47476 | 49565670 ~ 49566439 (-) |
| G1818710 | NA | non-coding | upstream | 86519 | 49604713 ~ 49605292 (-) |
| G1818715 | NA | non-coding | upstream | 91803 | 49609997 ~ 49610209 (-) |
| G1818723 | NA | non-coding | upstream | 99517 | 49617711 ~ 49621767 (-) |
| G1818417 | NA | other | downstream | 351084 | 49165751 ~ 49166367 (-) |
| G1818393 | NA | other | downstream | 391334 | 49125514 ~ 49126117 (-) |
| G1818059 | NA | other | downstream | 889605 | 48627364 ~ 48627846 (-) |
| G1817968 | NA | other | downstream | 1047416 | 48469598 ~ 48470035 (-) |
| G1817836 | NA | other | downstream | 1057411 | 48459026 ~ 48460040 (-) |
| G1818802 | NA | other | upstream | 199438 | 49717632 ~ 49719378 (-) |
| G1819189 | NA | other | upstream | 691280 | 50137937 ~ 50219233 (-) |
| G1819250 | NA | other | upstream | 783607 | 50301801 ~ 50305038 (-) |
