Gene
RNA
| Item | Value |
|---|---|
| gene id | G1820149 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 51275753 ~ 51277419 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2083002 | True | 335 | lncRNA | 0.38 | 2 | 51275753 | 51277419 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fam117bb | LOC107593013 | coding | downstream | 86017 | 51109316 ~ 51189736 (-) |
| carf | LOC106582551 | coding | downstream | 189831 | 51059254 ~ 51085922 (-) |
| LOC118943624 | NA | coding | downstream | 212704 | 51061656 ~ 51063049 (-) |
| LOC118943622 | NA | coding | downstream | 218241 | 51054964 ~ 51057512 (-) |
| sumo-1 | sumo-1 | coding | downstream | 222793 | 51041718 ~ 51052960 (-) |
| tspearb | tspear | coding | upstream | 118462 | 51395881 ~ 51450125 (-) |
| ube2g2 | ube2g2 | coding | upstream | 191378 | 51468797 ~ 51501268 (-) |
| LOC110501977 | LOC106562996 | coding | upstream | 224434 | 51501853 ~ 51504398 (-) |
| myo10l3 | LOC106582557 | coding | upstream | 235357 | 51510785 ~ 51699385 (-) |
| ankzf1 | ankzf1 | coding | upstream | 550854 | 51828273 ~ 51864161 (-) |
| G1820144 | NA | non-coding | downstream | 4394 | 51271010 ~ 51271359 (-) |
| G1820143 | NA | non-coding | downstream | 5767 | 51269774 ~ 51269986 (-) |
| G1820141 | NA | non-coding | downstream | 12794 | 51260792 ~ 51262959 (-) |
| G1820135 | NA | non-coding | downstream | 19686 | 51255822 ~ 51256067 (-) |
| G1820134 | NA | non-coding | downstream | 20592 | 51254829 ~ 51255161 (-) |
| G1820154 | NA | non-coding | upstream | 24381 | 51301800 ~ 51302070 (-) |
| G1820150 | NA | non-coding | upstream | 44372 | 51321791 ~ 51322789 (-) |
| G1820172 | NA | non-coding | upstream | 53529 | 51330948 ~ 51332120 (-) |
| G1820174 | NA | non-coding | upstream | 56366 | 51333785 ~ 51334114 (-) |
| G1820177 | NA | non-coding | upstream | 61163 | 51338582 ~ 51338833 (-) |
| G1820053 | LOC106582548 | other | downstream | 249572 | 51023438 ~ 51026181 (-) |
| G1820012 | NA | other | downstream | 378600 | 50896572 ~ 50897153 (-) |
| cd28 | LOC100136275 | other | downstream | 778762 | 50495067 ~ 50496991 (-) |
| si:ch211-67e16.4 | LOC106582542 | other | downstream | 811991 | 50460094 ~ 50465680 (-) |
| G1820212 | NA | other | upstream | 148984 | 51426403 ~ 51427042 (-) |
| G1820680 | cssa21h3orf70 | other | upstream | 681661 | 51959080 ~ 51959638 (-) |
| G1820825 | NA | other | upstream | 1119081 | 52396500 ~ 52412295 (-) |
