Gene
RNA
| Item | Value |
|---|---|
| gene id | G1820172 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 51330948 ~ 51332120 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106603920 isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2083028 | True | 363 | lncRNA | 0.45 | 2 | 51330948 | 51332120 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fam117bb | LOC107593013 | coding | downstream | 141212 | 51109316 ~ 51189736 (-) |
| carf | LOC106582551 | coding | downstream | 245026 | 51059254 ~ 51085922 (-) |
| LOC118943624 | NA | coding | downstream | 267899 | 51061656 ~ 51063049 (-) |
| LOC118943622 | NA | coding | downstream | 273436 | 51054964 ~ 51057512 (-) |
| sumo-1 | sumo-1 | coding | downstream | 277988 | 51041718 ~ 51052960 (-) |
| tspearb | tspear | coding | upstream | 63761 | 51395881 ~ 51450125 (-) |
| ube2g2 | ube2g2 | coding | upstream | 136677 | 51468797 ~ 51501268 (-) |
| LOC110501977 | LOC106562996 | coding | upstream | 169733 | 51501853 ~ 51504398 (-) |
| myo10l3 | LOC106582557 | coding | upstream | 180656 | 51510785 ~ 51699385 (-) |
| ankzf1 | ankzf1 | coding | upstream | 496153 | 51828273 ~ 51864161 (-) |
| G1820150 | NA | non-coding | downstream | 8159 | 51321791 ~ 51322789 (-) |
| G1820154 | NA | non-coding | downstream | 28878 | 51301800 ~ 51302070 (-) |
| G1820149 | NA | non-coding | downstream | 53529 | 51275753 ~ 51277419 (-) |
| G1820144 | NA | non-coding | downstream | 59589 | 51271010 ~ 51271359 (-) |
| G1820143 | NA | non-coding | downstream | 60962 | 51269774 ~ 51269986 (-) |
| G1820174 | NA | non-coding | upstream | 1665 | 51333785 ~ 51334114 (-) |
| G1820177 | NA | non-coding | upstream | 6462 | 51338582 ~ 51338833 (-) |
| G1820178 | NA | non-coding | upstream | 7276 | 51339396 ~ 51340174 (-) |
| G1820147 | NA | non-coding | upstream | 17090 | 51349210 ~ 51353257 (-) |
| G1820183 | NA | non-coding | upstream | 21279 | 51353399 ~ 51353861 (-) |
| G1820053 | LOC106582548 | other | downstream | 304767 | 51023438 ~ 51026181 (-) |
| G1820012 | NA | other | downstream | 433795 | 50896572 ~ 50897153 (-) |
| cd28 | LOC100136275 | other | downstream | 833957 | 50495067 ~ 50496991 (-) |
| si:ch211-67e16.4 | LOC106582542 | other | downstream | 867186 | 50460094 ~ 50465680 (-) |
| G1820212 | NA | other | upstream | 94283 | 51426403 ~ 51427042 (-) |
| G1820680 | cssa21h3orf70 | other | upstream | 626960 | 51959080 ~ 51959638 (-) |
| G1820825 | NA | other | upstream | 1064380 | 52396500 ~ 52412295 (-) |
