G1820178


Basic Information

Item Value
gene id G1820178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 51339396 ~ 51340174 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2083034
cggtaccgagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccaggacagagtcaatgtggaggctatatacagggggtaccggtaccgagtcaatgtggaggctatatacagggggtactggtacagagtcaatgtggaggctatatacaggggtactgatacagagtcaatgtggagactatatacagggggtaccggtacagagttaatgtgaaggctatatacagggtgtaccggtacagagtcaatgtggagactatatacagggggtaccggtacagagttaatgtggaggctatatacagggggtaccggtacagagttaatttggaggctatatacagggggtaccggtacagagtttatgtgaaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtaccgagtcaatgtggaggctatatacagggggtaccggtacagagttaatgtgaaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggtgtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagttaatgtggaggctatatacagggggtaccggtacagagttaatgtgaaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagtgtcaatgtggaggctatatacagggggtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2083034 True 779 lncRNA 0.49 1 51339396 51340174

Neighbor

gene id symbol gene type direction distance location
fam117bb LOC107593013 coding downstream 149660 51109316 ~ 51189736 (-)
carf LOC106582551 coding downstream 253474 51059254 ~ 51085922 (-)
LOC118943624 NA coding downstream 276347 51061656 ~ 51063049 (-)
LOC118943622 NA coding downstream 281884 51054964 ~ 51057512 (-)
sumo-1 sumo-1 coding downstream 286436 51041718 ~ 51052960 (-)
tspearb tspear coding upstream 55707 51395881 ~ 51450125 (-)
ube2g2 ube2g2 coding upstream 128623 51468797 ~ 51501268 (-)
LOC110501977 LOC106562996 coding upstream 161679 51501853 ~ 51504398 (-)
myo10l3 LOC106582557 coding upstream 172602 51510785 ~ 51699385 (-)
ankzf1 ankzf1 coding upstream 488099 51828273 ~ 51864161 (-)
G1820177 NA non-coding downstream 563 51338582 ~ 51338833 (-)
G1820174 NA non-coding downstream 5282 51333785 ~ 51334114 (-)
G1820172 NA non-coding downstream 7276 51330948 ~ 51332120 (-)
G1820150 NA non-coding downstream 16607 51321791 ~ 51322789 (-)
G1820154 NA non-coding downstream 37326 51301800 ~ 51302070 (-)
G1820147 NA non-coding upstream 9036 51349210 ~ 51353257 (-)
G1820183 NA non-coding upstream 13225 51353399 ~ 51353861 (-)
G1820184 NA non-coding upstream 13753 51353927 ~ 51354142 (-)
G1820188 NA non-coding upstream 25568 51365742 ~ 51366063 (-)
G1820198 NA non-coding upstream 56666 51396840 ~ 51397104 (-)
G1820053 LOC106582548 other downstream 313215 51023438 ~ 51026181 (-)
G1820012 NA other downstream 442243 50896572 ~ 50897153 (-)
cd28 LOC100136275 other downstream 842405 50495067 ~ 50496991 (-)
si:ch211-67e16.4 LOC106582542 other downstream 875634 50460094 ~ 50465680 (-)
G1820212 NA other upstream 86229 51426403 ~ 51427042 (-)
G1820680 cssa21h3orf70 other upstream 618906 51959080 ~ 51959638 (-)
G1820825 NA other upstream 1056326 52396500 ~ 52412295 (-)

Expression


Co-expression Network