G1820147


Basic Information

Item Value
gene id G1820147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 51349210 ~ 51353257 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2083000
atagactTCTCACTATATTCCACACTGtaatcctaaataatagacttctcactatattccccattataatcctaaataatagacttctcactatattccccattataatcctaaataatagacttctcactatattccacactataatcctaaataatagactactcactatattccccattataatcctaaataatagacttctcactatattccacactataatcctaaataatagacttctcactatattccccattataatcctaaataatagacttctcactatattccccattataatcctaaataatagactactcactatattccccattataatagacttctcactatattccacactataatcctaaataatagacttctcactatattccacactataatcctaaataatagacttctcactatattccccactataatcctaaataatagacttctcactatattccccattataatagactactcactatattacacactataatcctaaataatagactactcactatattccccattataatcctaaataatagacttctcactatattccacactataatcctaaataatagactactcactatattccccattataatcctaaataatagactTCTTACTCTATTCCCCATTATAAATCTAAATAATAGACTACTCACTATATTCCCCATTATATTCCTAAATAATAGACTACTCACTATATTCCCCATTATAATAGACTTCTCACTATATTCCACACtataatcctaaataatagatttctcactatattccccattataatagactactcactatattccccattataatcctaaataatagacttctcactatattccacactataatcctaaataatagactactcactatattccccattataatcctaaataatagactactcactatattccccattataatagacttctcactatattccacactataatcctaaataatagactTCTCACTATATTCCACATTATAATCCTAAATATTTAACTTCTCACTATATTCCCCATTATAATAGACTTCTCACTATATTCCACACTATAATCCTAAATATTTCACTTCTCACTATATTCCCCATtataatcctaaataatagactactcactatattccccattataatcctaaataatagacttctcactatattccccattatagtcctaaataatagactactcactatattccccattataatcctaaataatagacttctcactatattccccattataatcctaaataatagactTCTCACTATATTCCCCATTATTATCCTAAATTATAGACTACTCACTATATTCCCATtataatcctaaataatagacttctcactatattccacactataatcctaaataatagactactcactatattccccattataatcctaaataatagacttctcactatattccacactataatcctaaataatagactactcactatattccccattataatcctaaataatagacttctcactatattccacactataatcctaaataatagacttctcactatattccccattataatcctaaataatagacttctcactatattccccattataatcctaaataatagactactcactatattccccattataatagacttctcactatattccacactataatcctaaataatagacttctcactatattccacactataatcctaaataatagacttctcactatattccacactataatcctaaataatagactactcactatattccccattataatagacttctcactatattccacactataatcctaaataatagactTCTCACTATATTCCACACTATAATCCTAAATATTTAACTTCTCACTATATTCCCCATtataatcctaaataatagactactcactatattccccattataatcctaaataatagacttctcactatattccccattataatcctaaataatagactTCTCACTATATTCCCCATTATAATACTAAATAATAGACTATTCACTTTATTCCCCATtataatcctaaataatagactactcactatattccccattataatcctaaataatagattactcactatattccccattataatcctaaataatagattactcactatattccccattataatcctaaataatagaTTACTCACTATATTCCCCATTATAATCCTGTATGAAATCTATCCAAGAGGGAAACTGTCGCTGACAGTGAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107558662

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2083000 True 2296 lncRNA 0.28 2 51349210 51353257

Neighbor

gene id symbol gene type direction distance location
fam117bb LOC107593013 coding downstream 159474 51109316 ~ 51189736 (-)
carf LOC106582551 coding downstream 263288 51059254 ~ 51085922 (-)
LOC118943624 NA coding downstream 286161 51061656 ~ 51063049 (-)
LOC118943622 NA coding downstream 291698 51054964 ~ 51057512 (-)
sumo-1 sumo-1 coding downstream 296250 51041718 ~ 51052960 (-)
tspearb tspear coding upstream 42624 51395881 ~ 51450125 (-)
ube2g2 ube2g2 coding upstream 115540 51468797 ~ 51501268 (-)
LOC110501977 LOC106562996 coding upstream 148596 51501853 ~ 51504398 (-)
myo10l3 LOC106582557 coding upstream 159519 51510785 ~ 51699385 (-)
ankzf1 ankzf1 coding upstream 475016 51828273 ~ 51864161 (-)
G1820178 NA non-coding downstream 9036 51339396 ~ 51340174 (-)
G1820177 NA non-coding downstream 10377 51338582 ~ 51338833 (-)
G1820174 NA non-coding downstream 15096 51333785 ~ 51334114 (-)
G1820172 NA non-coding downstream 17090 51330948 ~ 51332120 (-)
G1820150 NA non-coding downstream 26421 51321791 ~ 51322789 (-)
G1820183 NA non-coding upstream 142 51353399 ~ 51353861 (-)
G1820184 NA non-coding upstream 670 51353927 ~ 51354142 (-)
G1820188 NA non-coding upstream 12485 51365742 ~ 51366063 (-)
G1820198 NA non-coding upstream 43583 51396840 ~ 51397104 (-)
G1820203 NA non-coding upstream 55398 51408655 ~ 51408994 (-)
G1820053 LOC106582548 other downstream 323029 51023438 ~ 51026181 (-)
G1820012 NA other downstream 452057 50896572 ~ 50897153 (-)
cd28 LOC100136275 other downstream 852219 50495067 ~ 50496991 (-)
si:ch211-67e16.4 LOC106582542 other downstream 885448 50460094 ~ 50465680 (-)
G1820212 NA other upstream 73146 51426403 ~ 51427042 (-)
G1820680 cssa21h3orf70 other upstream 605823 51959080 ~ 51959638 (-)
G1820825 NA other upstream 1043243 52396500 ~ 52412295 (-)

Expression


Co-expression Network