LOC118943926


Basic Information

Item Value
gene id LOC118943926
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57379129 ~ 57399437 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039277.1
tctctgatgtgattggtcaaaagaccaattagtgggaaaatATTAGAATCGTcagcctgtctaaacgcagcatAACTAATTAGGATAAAATATTTTCTAACAATTGGAGGTATATTTTTTACCAATCAGAGCAGCTTTTTAGCTAATAATTGCAATAACATATCTGTAGATTGTGGTTACTACATGCTGTGGCCACTGCTATTGAGGCTACTAGCGCTGTCTCTGCTCCACACTCCAGCACAATAAGTGGCGGTAATACATCAACGAAGGATGctaacagcccccccccccgaaCAACAAAATAACCACAGGAGAAGGCTGCTAGGTAGTGGCCTTTGTCCCCGCCGACATGTACTGCTTTCCGGCAGTTCTGTTAACAGTACGCCcagatgaggaggaagagaggagaaggaagcgagaggagtagggagggaggagggatgtaaCCTTGACTCAGATTACCAGCCGGCACACAGGCAGGAAGGAGGAAATGTCACCATGGCAACACAAACCACCAGcagatcctcttatccagagtgacttacagtactGGCCCCCCGTGGGAATtgcacccacaaccctggcgttgccaGCGCCATAATCAGCCATGCTCAGCCATGCTCAACTGAGCCACAAGGGACAACTTTAAACCCACTGCATTAGAGATTGGCATTTTATGTTTTTTGACAGTTCGAGTACCTCACATGATTTATTTTAGTACACAAATTTAATAAGGTATATACAGtactttgcaaaagtattcaccccccttggcgttttcacattttgttgcattacaacctgtaattgaaatggttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039277.1 True 821 mRNA 0.45 3 57379129 57399437

Neighbor

gene id symbol gene type direction distance location
LOC110503004 LOC106611018 coding upstream 535654 56829056 ~ 56843475 (+)
LOC110503003 LOC106611055 coding upstream 550397 56812404 ~ 56828732 (+)
LOC118943924 NA coding upstream 669163 56701366 ~ 56709966 (+)
LOC110503001 LOC106611028 coding upstream 678145 56613066 ~ 56727194 (+)
LOC110503000 prkce coding upstream 768371 56311640 ~ 56610758 (+)
LOC110503012 LOC106611138 coding downstream 100257 57499694 ~ 57540368 (+)
LOC110503013 NA coding downstream 145838 57545275 ~ 57550796 (+)
LOC110503040 LOC106579579 coding downstream 171309 57570746 ~ 57588495 (+)
LOC118943835 NA coding downstream 1465178 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 1937026 59336463 ~ 59345077 (+)
G1883796 NA non-coding upstream 43510 57335400 ~ 57335619 (+)
G1883779 NA non-coding upstream 64757 57313934 ~ 57314372 (+)
G1883776 NA non-coding upstream 70966 57307929 ~ 57308163 (+)
G1883767 NA non-coding upstream 90508 57288406 ~ 57288621 (+)
G1883763 NA non-coding upstream 94128 57284627 ~ 57285001 (+)
G1883843 NA non-coding downstream 60004 57459441 ~ 57459859 (+)
G1883848 NA non-coding downstream 71911 57471348 ~ 57471642 (+)
G1883849 NA non-coding downstream 73731 57473168 ~ 57473395 (+)
G1883850 NA non-coding downstream 74559 57473996 ~ 57474232 (+)
G1883863 NA non-coding downstream 96483 57495920 ~ 57496147 (+)
G1883457 NA other upstream 365911 57012037 ~ 57013218 (+)
G1882831 NA other upstream 835873 56533617 ~ 56543256 (+)
G1882830 NA other upstream 840646 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2375457 55002782 ~ 55003672 (+)
G1885587 NA other downstream 1462777 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2324827 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2328309 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2350281 59749718 ~ 59786095 (+)
G1886561 NA other downstream 2384549 59783986 ~ 59787989 (+)

Expression


Co-expression Network