XLOC_037498 (FP236644.1)


Basic Information

Item Value
gene id XLOC_037498
gene name FP236644.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 55666315 ~ 55698623 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073713
TTTTGCTCGAGCTGAATGGCAGGGTTGCCATAGTGACAGACGGTGCCAAAGAGCTGAGTCAAGAGACGGTCAAGCAGCTGACCAATCTGGGAATTCAGGTCATAACTGGAGGTTTTGTCTGCACTGAAGAAACTCTGCGAGGAAAATCTAGAAGCTAAAGCTGTTGTTATGCTGGTTCCTGAAGGCCCAACCGAAGATCAATTCCAGGCTCATTTTGCAAGCAACTTCCTGGGCCACTTCCCGTTGAGCCGCCTCCTGCTGGACAGCCTGGTGCATTGTGGGAAGGATGAGTCCTTTTCTCAGCACACGTGGCGTTACATCGCTAATGAAGCATGCGGATGGAGTAAACCAGCACAGCTTCTGTTCTCTTATTATCTGCACTATGCACTTGTGTCCAGCGGGTGTGCGGTGATGTACACTGCGGTGGAACCCTTTCTGGTGGACACTGTGAACCTCAGCATTACTGGACTTGCACAGAGAGCCTTCTCACGCCTCTTCATCAAGGTCAATATTTACtgtttcataatgtttttatgtttCGTAATACATAATACACTGTGGCCtcgcagcaagaaagttgctggcttgagtcccggctgagccagttgtcatttctgtgtggagtttgcatgttctccccgtgttggcgtgggtttcctccgggtgctctggtttcccccacagtccaaacacatgcgctatagggaaattgatcaactaaactggccgtagtgtatgagtgtgtatgtgtgaatgagtgtatgggtgtttcctagtactgggttgcagctgggggcatccactgtgtaaagcatatgctaaaatagttggtggttcattccactgattaataagggactaagtcgaagaaaagtttaatgaataaataaatgaatgaatgaatgaatgaatgaatgtgtaaactcaaaattattgaaatgtaaaGTATGAATTTTGATATTTAGCTGTAAAGTCCAAATTTAAAGACTTAGAAATTGCAATCTGTAAACGTAAAAATGTTACGCAATTGAGCTGCAAACTTTCATTTGTtagttttaatgtcaaaattgcGAGACGTAAAGACAAAAGTGTGAGAGATGTTAAGTCAAAATTGCAAGACATAGTCAAAATTGTGAAACGTGAAATCAAAATTGCCAGATGTATAGTTAagatggtaaaacaacaacaaaattgttagaCGTAATGTTAACATTGTGGAATTTAGTCTAAACGGTGAAATTTAACATCAAAATTGTGAGATGTGAAGTGGAAATTGTGAGACGTAAAGTCAACATTGTGAAAGGTAAAGTCAAAACGGTGAGACGTAACATCAAAACTGCgatataaagtcaaaattgtgagGTGTAAAGTTTACATTGTGAAATGTAATGTCTAAACAATGAAACGAGACAAAATTGTTAGATGTAAAGTCAACACTGCGAAATGTAAAGTCTAAGTGGTGAGACGTAATGTCAAAATTGCGTCACTTCATAATTTTGAGATATAAAATCAAAACTGCAAGC
>TCONS_00073714
CCACAtaagctcaagctcccctctcgctctgtcaacaggagggagccctgcatgggctcgaggatctcttgagctcagggctctctcccgggacagcatgccaaacaagcttttgatagatcatcagctgagtgtgaactgttgaaacacaaacaaacaagctaaCATGATGATCTTACAGGAGGGTTCATTTCTATCTGTCACATATGTTCTTCTCACTgacgtgtctgtctgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttccgtgTTTCCGCAGTGGACCTTGAGCTTCTGGATGTGGCATCAGTGAGGACTTACAGAGGTTTACACAGCGAGGTCTTCCACTGCACCTGCTCATCAATAATGCTGTTGTTATGCTGGTTCCTGAAGGCCCAACCGAAGATCAATTCCAGGCTCATTTTGCAAGCAACTTCCTGGGCCACTTCCCGTTGAGCCGCCTCCTGCTGGACAGCCTGGTGCATTGTGGGAAGGATGAGTCCTTTTCTCAGCACACGTGGCGTTACATCGCTAATGAAGCATGCGGATGGAGTAAACCAGCACAGCTTCTGTTCTCTTATTATCTGCACTATGCACTTGTGTCCAGCGGGTGTGCGGTGATGTACACTGCGGTGGAACCCTTTCTGGTGGACACTGTGAACCTCAGCATTACTGGACTTGCACAGAGAGCCTTCTCACGCCTCTTCATCAAGGTCAATATTTACtgtttcataatgtttttatgtttCGTAATACATAATACACTGTGGCCtcgcagcaagaaagttgctggcttgagtcccggctgagccagttgtcatttctgtgtggagtttgcatgttctccccgtgttggcgtgggtttcctccgggtgctctggtttcccccacagtccaaacacatgcgctatagggaaattgatcaactaaactggccgtagtgtatgagtgtgtatgtgtgaatgagtgtatgggtgtttcctagtactgggttgcagctgggggcatccactgtgtaaagcatatgctaaaatagttggtggttcattccactgattaataagggactaagtcgaagaaaagtttaatgaataaataaatgaatgaatgaatgaatgaatgaatgtgtaaactcaaaattattgaaatgtaaaGTATGAATTTTGATATTTAGCTGTAAAGTCCAAATTTAAAGACTTAGAAATTGCAATCTGTAAACGTAAAAATGTTACGCAATTGAGCTGCAAACTTTCATTTGTtagttttaatgtcaaaattgcGAGACGTAAAGACAAAAGTGTGAGAGATGTTAAGTCAAAATTGCAAGACATAGTCAAAATTGTGAAACGTGAAATCAAAATTGCCAGATGTATAGTTAagatggtaaaacaacaacaaaattgttagaCGTAATGTTAACATTGTGGAATTTAGTCTAAACGGTGAAATTTAACATCAAAATTGTGAGATGTGAAGTGGAAATTGTGAGACGTAAAGTCAACATTGTGAAAGGTAAAGTCAAAACGGTGAGACGTAACATCAAAACTGCgatataaagtcaaaattgtgagGTGTAAAGTTTACATTGTGAAATGTAATGTCTAAACAATGAAACGAGACAAAATTGTTAGATGTAAAGTCAACACTGCGAAATGTAAAGTCTAAGTGGTGAGACGTAATGTCAAAATTGCGTCACTTCATAATTTTGAGATATAAAATCAAAACTGCAAGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117810

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073713 False 1523 lncRNA 0.41 4 55666315 55698623
TCONS_00073714 True 1805 lncRNA 0.42 3 55684734 55698623

Neighbor

gene id symbol gene type direction distance location
XLOC_037497 NA coding upstream 4731 55661068 ~ 55661584 (+)
XLOC_037496 NA coding upstream 46621 55615510 ~ 55619694 (+)
XLOC_037495 mxra5b coding upstream 111581 55455801 ~ 55554734 (+)
XLOC_037494 nlgn4xb coding upstream 248119 55321322 ~ 55418196 (+)
XLOC_037492 NA coding upstream 408673 55247358 ~ 55257642 (+)
XLOC_037499 sept10 coding downstream 158570 55857193 ~ 55875077 (+)
XLOC_037500 NA coding downstream 182206 55880829 ~ 55887339 (+)
XLOC_037501 NA coding downstream 202096 55900719 ~ 55906990 (+)
XLOC_037502 NA coding downstream 204236 55902859 ~ 55904950 (+)
XLOC_037503 CR352223.1 coding downstream 217790 55916413 ~ 55916544 (+)
XLOC_037493 CABZ01113123.1 non-coding upstream 418001 55248200 ~ 55248314 (+)
XLOC_037491 NA non-coding upstream 430302 55222482 ~ 55236013 (+)
XLOC_037507 NA non-coding downstream 623351 56321974 ~ 56323914 (+)

Expression


Co-expression Network