XLOC_037507


Basic Information

Item Value
gene id XLOC_037507
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 56321974 ~ 56323914 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075250
GAGATATGCGATGCGGAATATAcgctttataagtgctaataaatagCCAATATCTTAGTAATAAACGGGCAATAAGctactagttaatagtgagaactaGTACTTACATTAAACTGTTATTGTTCTTGACTGCATTTAATAAACCCGTGCACAACTGTTCAGACTGGAGGTCACACACGCTACAGAGAATTATTGAACACAAGAGTTACAGTCAGTCAGAAGATCAACATTTACTTTAGGCTACAGGTGTTGACTGAAGCGTTTCACACAGGCGACAGCAGAGCATGTACAACACAAGAcaaaagacagacagagagaaaacGGGACAATCTTCAGTGAGACAGAAGTAAAGCTGGAATATTGCTGAGAAATATCAGGGAATATTTAAATCAGGACTTAAACTAGAACATGCACACAAAACTGATTATCTGATGCCGTTATGTCTTCTCTTTTCATTCATCATTTCTTTACTTAATTATAACTGCATTGTTTTGTCTAGTCTGCTGCATGTATCTTGTACTTCTGCAGTCTTCATATGTTTGTAAAGTGCTTCGAGATGCCTCTattaaaggcgctatataaagTGAAgtgtaatattattgttatattgtagTGCGCTGACACTCGTCCGGCTGTGAATCTACCCATATATCCAGCACTGAGCACAGTAGAGTCGTCTATAAATACACTCAGCTCTTCACTGATGGTCAATTACCTGCTGCGATTCCCGAGAGTCAGCGATGAGACCACAAATCAATTTACACATCGCTCCGCCATTCTCTGCTAAACCAAGACCTCCATCCCTCCTTTCATCTGCTCTTTTCATCCTGCTCTGCTCTTTGAAGAACAGCCTCCTGCTTTCATGAGCAGATCCTAAAgaggaaaaacacaaacatgGACACCAACAGGCCGCCGCCGCTCGGGCGTTTGATGTTGCACCAGCTCCACCTCAACCaaaatatacatgtaaatattCATCAAATATTCATATTAAAGCAACGGGGAGGGGAATTAAACAGAAAAGCTGATAGAAAtgaattatcattttttaaatgtatctaaaatcaaataaacagaCGGATGATTCTACTAATGTGGATAGATTATTGTCTTCATTTCAAAACACAAATCAACTGAACTCAAAAATgatgtttgtgtgtatttatggaCATTTTGTCTTGAAAACAGAAACTCAAAGACTTCCGCTCCGCTATCGTCAAATCAGCCACTATAAACTGATATATCGTCACCTgtttttgtcaactctgttaacatcaactctgttaccatcaactcggTTAACATCAACTCCGCCAACGCCAACTCCGCCAACGCCAACTCTGCCTTTGTGAACCTCATCACTGTCAACTTCCTTACCGTCAACTGCCATTGTCAACTCTGGCACCGTCAACTCGGCCATCGTCAACTCTGTTAGCATCAGACTTCAAGTTACAGTCAACTCCACCATCATTGACTCCACCACAGTAAACTCCACCAATCAACTCTGTTCTCGTCTACTCCACCACCATCAACATCAACATTATCATTTCCATCACCGTCAATCCTGCCAAAGTAAACTCTGCCATTGTCAACTCTATCATCTCCGCCTTCATCAACTCCGCCACAGTAAACTCCACCTTCGTCAACTCCGCCACAGTAAACTCCACCTTCGTCAACTTCGCCATCGTCAACTCCACCTTCGTCAACTCCGCCACAGTAAACTCCACCTTCGTCAACTCCGCCACAGTAAACTCCACCTTCGTCAACTCCGCCACAGTAAACTCCACCTTCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075250 True 1792 lncRNA 0.42 2 56321974 56323914

Neighbor

gene id symbol gene type direction distance location
XLOC_037506 cnot11 coding upstream 76825 56232548 ~ 56245149 (+)
XLOC_037505 TBC1D8 coding upstream 99960 56194410 ~ 56222014 (+)
XLOC_037504 edar coding upstream 149217 56103173 ~ 56172757 (+)
XLOC_037503 CR352223.1 coding upstream 405430 55916413 ~ 55916544 (+)
XLOC_037501 NA coding upstream 414984 55900719 ~ 55906990 (+)
XLOC_037508 gpr39 coding downstream 98397 56422311 ~ 56426047 (+)
XLOC_037509 CABZ01079480.1 coding downstream 119502 56443416 ~ 56459826 (+)
XLOC_037502 NA non-coding upstream 417024 55902859 ~ 55904950 (+)
XLOC_037500 NA non-coding upstream 434635 55880829 ~ 55887339 (+)
XLOC_037498 FP236644.1 non-coding upstream 623351 55666315 ~ 55698623 (+)

Expression


Co-expression Network