XLOC_037626 (BX942813.1)


Basic Information

Item Value
gene id XLOC_037626
gene name BX942813.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 7357819 ~ 7359484 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073887
GGGCACAACCGCTGAGCAACAGGTTTAATGCGCTCGCAATCGAATCAAAGCCACTGAGTGTGTTTCTAATGGGCTGATAATTGAATTCATAGCAAGCGCGTTCTCCAAGTGCCGCTCACCTGCGTCATGAGTCGATCCGCACCTGTGTTCTCCTCATCTTTGAAGATGATGTCCGGGTTGTAGTTCGGCGTGAGCTCTTTAAAGCGCTCTGAGTTCCTGGTGATCTTGCCCTCGATTCTCCCGCTGGCTCCCAGTGTCTTCTCGGCTACATTTGGACTAAACTGCTTGTAATTAAGGGGTGTCAGTTTCTTCGGAGGCCGCCTTTTCCCATGTCCCCTCCCCGGCCCACAGCCCTCGTTAACAGGTGCGAAAATCAGGGCGCAGCCGACGAGGAGCCCAAACACCACGGGGAGACGCATTCCACCGCAAGCGGCCGGGCACTCCGATGCGGAGTGGTACGGTGGCACAGCTCGCCGTTCACTGAGAAACTACCCCCCGCGAGATCCTTCTTCCCCCCCACGGGGTAAATGATGGGGAGGACAAAACCTCTACTTCTTTATTAGCCTTATCCGTGCCATCGTCCGTGCGTAAAATTCGCTTTACGCAAAGCCAGTCATGGAGAGCCGCCGGAGAAAAGATCCAGTGATACCAAATGTTCAGTGCCCATAAAACGCGAAACGCTGGTCTCTCGAGAAAATCACCCAAATGAGAGCGAGCGGGCAagtccatttatttatctaaCAGATTccaggagagaaagagagagagagatagactcCGGGAGAGCTTTCAGAGAGACTCCTGCTGTCTTTGAATGCGTGCGTCCGTCAAGTGATCTGAGCTGCCGGCGCACTGAAGACAGACCGCACCCTGCCAGCTTCTTGCCCCTCTCTATCCCTGCCTGCCACTCCTCCCCATGGGTCACATTGGGTGCGTCGTGCTGTATGCCCACCGGCTCCCTTTAACGCTTCACAGCGCCTGGCTGGGCAAACACACGTCTCGAGGAAGAACTGGACTCAGACTCTCCCATTCATAGATCCACAAATAGATAAGGGGCCTGGCTGCTCCTCAAACAAACGTGAGCGACTGCTGCCCTCCCCTACCTGCCTAACACTGATATGATGAAGGAAACACGGCAGACTACAACTTGCCGAAGGATTGATTGGTTATTTATTGATCAGAAGACATCCGTTTGGGTTCAGTTTAGGTGGCAGGTGTAAGAGTTGAGagatgattgatttatttattttgtcctgaACTCTATGCAAAGTTACAGAAGCTAATTTGGAAATGCTGTACTTAAAGTAAACACTGTAAATGTAAACCCATGAACATCTTTGCATAAACACTGCACTAATGAGATATACTGtaaagtagttttataaatgataattaacatttaaaaaaacttttttgtgtaGCTTTTAAACCCATAAATGGAGACATTTTTTTGACATGTGTTTGGTTTAATTGTTTTCAGAGCTGACTACATTTTAACCATGTTTTTCAGACACCCATTtgaaaaatacagtacaattttgtgacttatttttatttaagaatcAGTACAGACCCCAAATACTAATTGCCATGTTTTAAAATTTATACCATATCCTTTGAACCCATTTGTCAGCAAgaagttttaataaattaaaatgtagagCAA

Function

GO:

id name namespace
GO:0010876 lipid localization biological_process
GO:0032309 icosanoid secretion biological_process
GO:0006642 triglyceride mobilization biological_process
GO:1903963 arachidonate transport biological_process
GO:1901571 fatty acid derivative transport biological_process
GO:0046889 positive regulation of lipid biosynthetic process biological_process
GO:0006979 response to oxidative stress biological_process
GO:0060191 regulation of lipase activity biological_process
GO:0060192 negative regulation of lipase activity biological_process
GO:0015918 sterol transport biological_process
GO:0055088 lipid homeostasis biological_process
GO:0055092 sterol homeostasis biological_process
GO:0044281 small molecule metabolic process biological_process
GO:0050482 arachidonic acid secretion biological_process
GO:0071715 icosanoid transport biological_process
GO:0030301 cholesterol transport biological_process
GO:0046717 acid secretion biological_process
GO:0042632 cholesterol homeostasis biological_process
GO:0051346 negative regulation of hydrolase activity biological_process
GO:0006869 lipid transport biological_process
GO:0005764 lysosome cellular_component
GO:0005773 vacuole cellular_component
GO:0000323 lytic vacuole cellular_component
GO:0044421 obsolete extracellular region part cellular_component
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component
GO:0032994 protein-lipid complex cellular_component
GO:1990777 lipoprotein particle cellular_component
GO:0034358 plasma lipoprotein particle cellular_component
GO:0034359 mature chylomicron cellular_component
GO:0034361 very-low-density lipoprotein particle cellular_component
GO:0042627 chylomicron cellular_component
GO:0034385 triglyceride-rich plasma lipoprotein particle cellular_component
GO:0061134 peptidase regulator activity molecular_function
GO:0004175 endopeptidase activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0005509 calcium ion binding molecular_function
GO:0120013 lipid transfer activity molecular_function
GO:0120015 sterol transfer activity molecular_function
GO:0120020 cholesterol transfer activity molecular_function
GO:0004857 enzyme inhibitor activity molecular_function
GO:0004859 phospholipase inhibitor activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function
GO:0055102 lipase inhibitor activity molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097968

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073887 True 1666 lncRNA 0.47 1 7357819 7359484

Neighbor

gene id symbol gene type direction distance location
XLOC_037625 mitd1 coding downstream 70444 7275185 ~ 7287375 (-)
XLOC_037624 si:ch211-121j5.4 coding downstream 99942 7240896 ~ 7257877 (-)
XLOC_037623 creg2 coding downstream 118980 7228083 ~ 7238839 (-)
XLOC_037622 mgat4a coding downstream 144047 7091028 ~ 7213772 (-)
XLOC_037621 coa5 coding downstream 268516 7081577 ~ 7089303 (-)
XLOC_037627 slc23a3 coding upstream 12478 7371962 ~ 7378566 (-)
XLOC_037628 slc23a3 coding upstream 30723 7390207 ~ 7390388 (-)
XLOC_037629 slc23a3 coding upstream 34745 7394229 ~ 7394412 (-)
XLOC_037630 bin1a coding upstream 51314 7410798 ~ 7444753 (-)
XLOC_037631 NA coding upstream 139776 7499260 ~ 7505531 (-)
XLOC_037618 BX842683.1 non-coding downstream 640018 6717677 ~ 6717801 (-)
XLOC_037614 NA non-coding downstream 809023 6531549 ~ 6548796 (-)
XLOC_037613 FQ377643.1 non-coding downstream 948548 6409157 ~ 6409271 (-)
XLOC_037602 NA non-coding downstream 2490380 4866100 ~ 4867439 (-)
XLOC_037598 FP102171.1 non-coding downstream 2910715 4443918 ~ 4447104 (-)
XLOC_037636 NA non-coding upstream 582285 7941769 ~ 7942597 (-)
XLOC_037637 NA non-coding upstream 800857 8160341 ~ 8163995 (-)
XLOC_037638 NA non-coding upstream 924671 8284155 ~ 8286208 (-)
XLOC_037644 BX537313.1 non-coding upstream 1649639 9009123 ~ 9024269 (-)

Expression


Co-expression Network