XLOC_037637


Basic Information

Item Value
gene id XLOC_037637
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 8160341 ~ 8163995 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075293
GGGTAGAGGGGTGCCAAACTTTTTGCATAAGACTATATGAATGTAAGCACATGATCATAAAACATAGCAAACACATTTatgggaaaaacaaaaacaaaagtaaaatgatgcaatagaataaaaaaaaaaaaaaacatttgcatgaaGAGAttgaagtagtttttttttaggtCAGTTGACTGACGCTGTGCTTTATTGCTGTACAGGagttttataaaacatttcaaaacaaaatatgTACCAAGACATACATTTCTCTTCTTTCCCACAAACATGTATTGAAGTAATAGTCATTTTTATATATCATTTACACAAGGAtcagaataaactaaaaaaacaaacaaactaaaacacatCGACTACAAAAGACAGCAACACTTATGATATTTCAGTATTTCATTGAACTCTGCGTATTTGAGCAAGAGCTGAGATATGAATGGGTTTGCTTTCATTTGTCGAGACATATATAGTAGAAATCAGCAAATCAAAACCGAGACCAAAGGTTAATGTAATGATGTTCTTGGACTTTTTTGGCTACAGTTTTGACTGACTCGCATGAGCTGGTCTCGACTACAACACTGGGATATGTTCAACACTCACTGTGCTTAGCCAAACCATTTTTGGCTACTGTTCAAAATCAAATCAGGTCCATTAATATGAGGCTGTGTTGGGCTGGAGGGTGAGAGGAAGTTCATAACATTTACGTCTGGATGATTCCATAGTATCAGACAGAGAGGGCAATGATGTGTATATCTCCACAACGTATCAGACTAAGCACAGCAAAAAACATACAGACGGGCCATGTACCTAAGAGAGATCTCATGCGTTAACATACGTTCCTTTTTTAACAACAGAGTAAAAAAATTGGGCTCATACTGTACAgttcttttcattctttttttaaatattgacgATAAGCCAATACCATAGACATTATAAAATAGCAATTTTCtgtcaataaataaatgcttCAAATAATAGTACCGTAACCCTGTTAAGCAATAGCAATGCAAAGCAGCTTTTCTAGTCATATCCACCGAAATGATATTCAGTCTTCTTCAACACTGGCCTGCACAGTGATTTTAATATGCGTCTCTGATCTGCAGGACTGCACAGCAGTGAAAGATGCTTAAACCACCGTCCAATGGAATGGGGAAAGGGACTATTCACATTACTTGGGAAGATAAGAGACAGGAGATATGAGATACATAAGCCTATTATAGAGCTGTTTGATATGAGTTATAGAGCCAGAAAGAATGACTTCCAAAACTGGACCTTTAAACTCATCTCTACAGTGTTGATTGAATTTTGTATCTAGTTTCACCTTGAAAATTCAAGTTTCAATACAATCAATAAAAAATGTGTCACTTAAACTATAACAAGTTCTCTGACAAATTCTCTGACTTAATCTATGCACATTCAAAAATCAAGACCTTGAGATGGATCACTATGTTGGAGGGGGCTGCATGGGCGTTCTTTTATAAGGTTTAACATTTAGGGACCCCATTTTACCCAGCAAGACAAGACGCCGCCTTCAGAATAAGCACACAGGCATGGAGTAACGCTCTTAATGAAGCTTAAACAAAACAGCGGCAAAGTGCAACTCAAACATTCTTGCACAAACACAACGTTCTGTacaatacattaaatatttttatacattgacCACAGTCCTGTTGGGATGGGGAACGGCTAAAGAATTCACCATGAATAAACAATCATCCTGTACTAAAATGATATTCACACTATAAAACCATCTTAATCCTTTTTCCATTACGTCCCTGGACATTTAGGGACATCTTTCTATTATAAAGACAATAATTCTTTGTCATCATACTTCAACATTCACAATCTGTACATAACCCATCTTTTCGCCCCAAACCTGAAGGACTTGAAGTTCTGCTTATTCTCAGAAAAGTGCCTGTTTGTCAGTTGCAAAGCTCAACTCATGATCATGGTTGGTCTCTAGTTTTAAACCTAGTGTGTAAGATCCACAAAAATATTTACCCAAGGTCTTTCAGGTAATAAATCTGTATGTGCGCACTATGGCTAAATCAAATGCCTTGAACTATTTTGTGGGCATCTGCGTACCTTCACTTTAGGAGAGATGAACATTCTGGAACTTGTGCTGTTTGTACATGGGTACTAAGGTACTAACATGTTTTCATACAACCAAGCATTCATACATAAGCACCTTTGAGAAGAAGGTCCACAAACAATAGATCAGTCAAATCGGCAGTAGTATCCATCACTAGGAATCGTTGTTCCATCTAGTGTTGCATTTGGAGAATTGTGCTCTTTAACCATTCAATATAAATCAAGCATCTTCAAGTTCTTCTTCTGAAATCTAACGGTTTCTTGTAGCAGAAGTTTCCACAAATTAGCTTAGATTTAATGATGGATTCAGTCCAGAAGCTGGTGGAAATGTTGTAGACCTATGATGTTACTCGTGATTTCCCTGAACCCTGACCTTTTTGCAAGGTCACAACCTGTGTGTGATGGTTGCCACCTCTGATAGAGGGTAACCAAAGCACCTGAAAAAAGCATGAGGTGTAGCTGCTTCTCTGAACCTGAAGGACTTAGTTCACAAAGCTAGACCAAGAGGCcaacacaaagtttttttttttttgtcttgtaaaCTTTAAGGTCAGTCGCTAACACATGCCTCAGATAGCATTGATGAGTAGCAATCAAGACGACATGAGATTCTTTTTCTCCAAAAGGCTTTACATTTAGGACACTGTAAAAGGAGATTAATAGAAGCCATATTCCCTTTCGTCTGCCTGGCAATGACTATTCAGGATAGGGCTCTGTAGTCCTTGGGGGTCTCCATGTTATTTGGCGATTAGTTGTAGAGATGACGTCAAGCAAATTTCCATTTCAAAAATGAAGAGGAAGAAGAACAACTTTGGATGGAACGCCATCCTCTCATGAGTTCTGAGTTTGACTGTAGAGGCTACCCCTGTGCAAGGGGTAAAACATAAGGGCATCATCAGGCCTAAGGAGTGGGGTTTAACTGAGGGGGAACTCAGCAAGACCACAGTCTCTAGGGTGACGCTTTCTTTCTGGGGCTCTTGGTCTTAACTGTTAGGGTGGGTGAGGTGTTTGTGTGGAGCCAAGCGTTCTGCCAGTCTGGTCGGCCATCACAAACACTTCTCCGCCAGCGCAGTAATTCCTGCAGAGTGGCCCGCTGTTCCCCACACGCACGTGACCTCTGGGGCACCTGAGAAAATAAGAGGTCATTTTAGTATAGTGTATAATGGATGTATCTTCACTAAGTGTGGTCAACCTTGCTCCAAGACAGgggtgtccagactcggtcctggagggctgacgtcctgcagattttagctccaacttgcctcaacacacctgcaaggatgtttttagaatgcctagtaagagcttaattagctaccCCAGGTGTTTcttattggggttggaactaaactttgcaggacaccggccctccaggaccgagtctggacatccctgcT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075293 True 3497 lncRNA 0.40 2 8160341 8163995

Neighbor

gene id symbol gene type direction distance location
XLOC_037636 NA coding downstream 217744 7941769 ~ 7942597 (-)
XLOC_037635 si:ch73-199e17.1 coding downstream 476339 7678136 ~ 7684002 (-)
XLOC_037634 tuba8l3 coding downstream 486485 7662638 ~ 7673856 (-)
XLOC_037633 dnajb2 coding downstream 505040 7621622 ~ 7655301 (-)
XLOC_037632 desma coding downstream 621015 7515864 ~ 7539326 (-)
XLOC_037638 NA coding upstream 120160 8284155 ~ 8286208 (-)
XLOC_037639 si:ch211-145c1.1 coding upstream 124273 8288268 ~ 8314028 (-)
XLOC_037640 irs2b coding upstream 265244 8429239 ~ 8454060 (-)
XLOC_037641 col4a1 coding upstream 470234 8634229 ~ 8670158 (-)
XLOC_037642 rab20 coding upstream 723533 8887528 ~ 8895243 (-)
XLOC_037631 NA non-coding downstream 654810 7499260 ~ 7505531 (-)
XLOC_037626 BX942813.1 non-coding downstream 800857 7357819 ~ 7359484 (-)
XLOC_037618 BX842683.1 non-coding downstream 1442540 6717677 ~ 6717801 (-)
XLOC_037614 NA non-coding downstream 1611545 6531549 ~ 6548796 (-)
XLOC_037644 BX537313.1 non-coding upstream 845128 9009123 ~ 9024269 (-)
XLOC_037645 NA non-coding upstream 862388 9026383 ~ 9050515 (-)
XLOC_037649 NA non-coding upstream 1122424 9286419 ~ 9289070 (-)
XLOC_037651 AL954142.4 non-coding upstream 1191377 9355372 ~ 9370866 (-)

Expression


Co-expression Network