XLOC_037651 (AL954142.4)


Basic Information

Item Value
gene id XLOC_037651
gene name AL954142.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 9355372 ~ 9370866 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073926
AGCATCTTGGCAGGAAGCCGGACAAGAAGAGCATTCAGTGCTTTTGCTGAACAGTCAGATGATGTAAATCTTTATCTTAATTTGTTTGTAGTTGATTTCAGTTGGATCATGAAACATTTACAATGGATCAtcttatttagtttatttgttttatttatgatcATCTTTCCGCCGACTTTGGGTGTGCACATATCTATAATAAGAGGATGGAATTTAATGTTTCCTCTACCTGAACTCCCACTAGTCAACATTAATACCATTGAATGGAAATACCACACAGTCAGAGACATCCTGCTGGCCACTATTAACCTAAAAACACAGCAAACAAAACTCTTCAGCAAGAGGACTGGAATGCAAATAATGGAGAATGGATCTCTTCACATTGAAGATTTAAAAGATGAAGACTCTGGGAACTACTCGTGCACCATCGTTTTCTATGATCAAAGGATGCAGATAGAGCAAATTTATCTTCAAGTACTTGATgATTTAAAGACTGAACCAACCAGCACAATTAACACAACTACTGCTGAAATCAAACAGCCAGGACTCCACTTTCCTGTAGCGGTGTTGATTGCAATATCTGTATGTTCAGCACTCATAATCCTTTTAATTGTATTCATTATCTTCTGCACATGTAGAAAAAAGTGCTGCCAGACTTCAGAAGAACCTATCTATGTCAATAAACCAGTTTCTCAAGGACATAAAAGGTCACAACTGGGCAGATGGAAATCAGATACAACCTTATAAAGACCCCAAATGAGCAAAAAGCTAGGAACACTGGATGATGTTGCTGCAGATAAACTAACTCTGTCAACTACAATTGTACAATTGAGTGCAGCAGTAATGACATACAGCATGCTTGGTGGCCAACCTGAAAGTATCACCCTGGATCCCTCAACAAAGGCCGATAGGATTTTGAATTTGGTTTTTGTAATATCGTGTGGAATATAATGGATCAACCAAAGTTTGTTTTATTCAACATTGTAATCTGCAcaatttatgttcatttattaaagCAATCAAACACAAAAAAGAACATCCATCTTTCATTACacgtacatgttttttttttaattattattatgtataactACACATTATGCATTTGATTATGTACAACAAACTGTAAAATGAGTGTAAGTAAAAGTTAATTACGGATTAGATTTAAGGGATTTAACCAAAAACATTGCGAAATCTATTTGACCTGATGATAAACAGTTTTCTTTTTCTCCACAGCTTTAACAatgcaatccaggctcattctgaaaacgtagtccagcggacgtttctggaggccatgaaatacgtcccgggaggtacgtatttgtgcagcttttgttttcgcgaatacgcgagaggccactgtgtgtgctttttcatatctcgaaagtctctcgcgagtgccgttcgtgcccgcgttgttctcgcgtcaacccaccagaggtcgctgtctggctgaccgaatgattgaccgcacgactggccaatcggctggcccaccctcctcctaccctgaacccaaccagttttaccagacccgcccgcccgctcacttccctaaacccgagcaacaatttagaaaagctgtctagaaaaaaaaaatctttttcttttttaccccgttttcagattttaccacgttctcaccctgttatgaactcgtttgctttattttttggattttgtttttgtcttacctggtttctggaaccgctcttccctggactcgaacccggacgcctttgtcaactcctctctgcatctgaagtccgccgacgcacacgatgagctgaccggacaaactgactgcagcgggaaagccttccacacggaggtaagcggtcagccgaaAAGCGCGAAAGgaaacggcgtcacaccgccctgtagcgttcgcttaaaaaaaaatgcaatgcagccatacgtacctcctgggacgtatttcgtggtctccagaaacgtcaacgggactacgttttcagaatgagcttgggttgtaacAATGTCCAGCAAAAAGGATTGATTCTAAGCTTTGGTCTACAATAAATTACTTAGTGGCTACTTTATTACAAATACGCTCTGCTAGTAATGGGTTAGACTTATTTTTACAGGCCACACTTATTTGAAAAAAAGTATTTCATTTCTGTGAACTGCAAAATACAATGCTCCGGGTACATTTcaatgcacatttcagatgacaaatccactagagggcgctgtgtacattttaGCCAATCTGTTATGTTGTACTTACACTCCCTTCTTGTACTTATTCATGAATCATGAGAAGACAGAGCTTATTACCTAGGCCAGCAAACCACTTACCCCAACCCaaacaataatgttttcaaatgcaaaataaaagtgcACTACAACCACC

Function

GO:

id name namespace
GO:0098661 inorganic anion transmembrane transport biological_process
GO:0006811 ion transport biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117430

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073926 True 2377 lncRNA 0.40 5 9355372 9370866

Neighbor

gene id symbol gene type direction distance location
XLOC_037650 zgc:113337 coding downstream 7314 9322424 ~ 9348058 (-)
XLOC_037649 NA coding downstream 66302 9286419 ~ 9289070 (-)
XLOC_037648 si:ch211-214p13.3 coding downstream 72853 9251466 ~ 9282519 (-)
XLOC_037647 u2af1 coding downstream 112595 9230446 ~ 9242777 (-)
XLOC_037646 cbsb coding downstream 126431 9180620 ~ 9228941 (-)
XLOC_037652 si:ch211-214p13.9 coding upstream 40143 9411009 ~ 9415000 (-)
XLOC_037653 si:ch211-214p13.9 coding upstream 44794 9415660 ~ 9419704 (-)
XLOC_037654 gsk3ba coding upstream 206877 9577743 ~ 9671244 (-)
XLOC_037655 gpr156 coding upstream 305060 9675926 ~ 9705512 (-)
XLOC_037656 lrrc58b coding upstream 348359 9719225 ~ 9732212 (-)
XLOC_037645 NA non-coding downstream 304857 9026383 ~ 9050515 (-)
XLOC_037644 BX537313.1 non-coding downstream 331103 9009123 ~ 9024269 (-)
XLOC_037638 NA non-coding downstream 1069164 8284155 ~ 8286208 (-)
XLOC_037637 NA non-coding downstream 1191377 8160341 ~ 8163995 (-)
XLOC_037663 NA non-coding upstream 997514 10368380 ~ 10370625 (-)
XLOC_037667 BX000444.1 non-coding upstream 1475052 10845918 ~ 10846549 (-)
XLOC_037671 NA non-coding upstream 2200446 11571312 ~ 11572354 (-)
XLOC_037673 NA non-coding upstream 2225121 11595987 ~ 11655031 (-)
XLOC_037675 NA non-coding upstream 2451513 11822379 ~ 11855305 (-)

Expression


Co-expression Network