XLOC_037739 (zgc:152951)


Basic Information

Item Value
gene id XLOC_037739
gene name zgc:152951
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 19340216 ~ 19366538 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074095
TGATGCTCCCTCTGCTGTCCTGTCGGCTGCTTCTCTATTCGCTGATTTTTCAGTCATGCAGCAGCAGCAGATGAATATAATTGTGGGTCATTATAAACAGAATTATAGTGCGTCGAGACTTTGCACAACAATGTTTTAACGACTGCTGACTACGAGTGAAAATTAGCACACTCAGCAGATCGGTTTGTGGCGTAAACACAGAGTCGAGTGTATGTGACGGTGGACAAACGCCGCACTGACGCTCATTAAAGCAACTGGAGAGCAGGGGCTGTGATGGTGGAGGACGGGACGCTCATGAAGGGCCGGGTGACGGTGTACTCTGTGCCAGGCTGTCCACACTGCACACGGGCCAAAACCACTCTGGGTGCGTTAGGCGTTCCCGTGTGCGACGTGGATGTGAACAAACACAGAGAAATCAGAGCACGAGTGAAGGAGCTCACCGGCCACTCTTCTGTACCCCAAATATTCTTCAATAACCTTTATGTTGGAAACAATGAAGACCTCCAGAACCTGGACCCTAAGCGGCTTGAACATCTCCTCCTGTCTGTGAGGGATGAAGCAGTGCCTCTGGATGCTCTGCCTGTGCCTGTTGAAAACTGCAGATCTGAGACTGATGGAGGGTGTGAGCTCTCGGAGACGCTGAGGAATCTGATCCTGAAACTTTACTCCGATCACCTCTCTGAAAATGGCAAGACAGTTGATTACAAGGCAATGTCCCGGAGCCTGTACTTCGAGCGCTACTGTGATCTGGCTGTCAGACTTCAGCGTGTGGAGCTGCTCTCTATGAGTCGAGAAGAAAAACTGGCCTTCTTTATCAACATCTACAACGCACTTGTCATCCACGGGAACCTGCGTCTGGGCTTTCCCAAAAACATATGGCAAAGGTATCGGTTTTTTAACTACGTGAGCTACTTCATTGGCGGTGAGGTGTTCACACTGCAGGATATTGAGAATGGAGTACTTCGAGGAAATCGAAAAGGTGTGGGACAATTCCTGAAACCCTTCTCCAGGGATGACCCACGACTGCAGGTGGCGCTTCCTGACGTCGAGCCTCTTATTCATTTTGCACTGAATTGTGGTGCCAAGGGCTGCCCACCGATTAAAACATACACTCCGCAGGACATTGATGGTCAGTTGCGCACTGCAGCTGAAGCTTTTCTGGAGAATGATGACAGCTGTGTGATTGACAACACAGGACGAGAAGTGAAGCTCAGCCAGATCTTTAAGTGGTACAAGGGCGACTTTGGAGGCACTGATGATAAGGTGCTGAACTGGGTGTTTGACCACATGAGAGCATCGCAGAAGAAGAGGAAACTACAGGCTCTGCTGTCAACAGGAAAGGTCAAAGTGAGCTTTCTGCCCTATGACTGGTCTATAAACAGCACAGACTGATCTAAAGCACATTCTCAGGATCGCTGTGACTCATCGCGGCCACTGTGTGTTTCTATtgaacacacgcagcgatctcaaaACAAAAGTGCGCCCTGAAACTATGCATTCAGATCCCTTTACCTTTCATCCACCTCCCAAAAGGGCAACGTGATATTGTAGCCTGATATTTCTGACAAAGGTTAATTTCTATAACTTTTAAAATTGTATCGCAGCATTTGCACTGGTTGTTatgcaattacattttaaatactgtCCTACCAAGATGTCCTTTTgaataaatatagtttatttaaatgATCTAA

Function

symbol description
zgc:152951 Predicted to enable electron transfer activity and protein-disulfide reductase activity.

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0005575 cellular_component cellular_component
GO:0009055 electron transfer activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060929-416 Predicted to enable electron transfer activity and protein-disulfide reductase activity.

Ensembl:

ensembl_id ENSDARG00000068663

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074095 True 1694 mRNA 0.48 9 19340216 19366538

Neighbor

gene id symbol gene type direction distance location
XLOC_037738 pou1f1 coding downstream 178234 19132885 ~ 19161982 (-)
XLOC_037737 crfb2 coding downstream 247894 19073556 ~ 19092322 (-)
XLOC_037736 CR361551.2 coding downstream 271052 19052374 ~ 19069164 (-)
XLOC_037734 NA coding downstream 299189 19027152 ~ 19041027 (-)
XLOC_037735 CR361551.3 coding downstream 310749 19029353 ~ 19029467 (-)
XLOC_037741 NA coding upstream 54708 19421246 ~ 19421872 (-)
XLOC_037742 FP017279.1 coding upstream 102231 19468769 ~ 19471475 (-)
XLOC_037743 wdr4 coding upstream 111149 19477687 ~ 19489264 (-)
XLOC_037744 tmprss3a coding upstream 183829 19550367 ~ 19585848 (-)
XLOC_037745 fgf9 coding upstream 238329 19604867 ~ 19610436 (-)
XLOC_037732 NA non-coding downstream 428501 18908203 ~ 18911715 (-)
XLOC_037729 NA non-coding downstream 615760 18720676 ~ 18724456 (-)
XLOC_037728 NA non-coding downstream 763023 18572373 ~ 18577193 (-)
XLOC_037746 NA non-coding upstream 288168 19654706 ~ 19658313 (-)
XLOC_037748 BX677668.2 non-coding upstream 349044 19715582 ~ 19716857 (-)
XLOC_037749 BX677668.1 non-coding upstream 383813 19750351 ~ 19756102 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000080_03280495_03294553 NA coding CI01000080 null 3280495 ~ 3295235 (+)