XLOC_037741


Basic Information

Item Value
gene id XLOC_037741
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 19421246 ~ 19421872 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075332
ATCATCCGATACGCCGAAGACGCGCTGCCCATCTCGCTCCCCGCTCTCAGCCTCCGCTGCCCGGGACTGCCGTTCTGTGCCTCCGTGACGGACCTAATAGAAAGTTCTGACCGTGTCTTTGAACCGGAGCAGATTTAACAACGTCGTAGAGACTGTGTTGCTCATTGCCACTGATCTCTTAACTCGTCGCCCCCCCTTTCACTCCCACTAGTGCGCGCGCGGGAAGAGAAGAAGCGCGCGCACTTCTTGTGATCACCATAGTAACCGAGCTCTACAAGGACGCGCGAGGATGCAGCGCAGTGTGAAACCGAAGGGTCATGAAGCAGGCATATTTCCAGAGCTAACATTTCGAGTTTTTTGGTTCCTCCTGGGCTAGTCCAAAACATGAAGGTAACTAGGGATACTGCTATCATGAAAACGATCATCAACACCCTTTACAAAGACGGTGAGCCATGTATGTCATAAATAAAAAAGAGCTGGAAAGTTAACG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075332 True 490 lncRNA 0.51 2 19421246 19421872

Neighbor

gene id symbol gene type direction distance location
XLOC_037739 zgc:152951 coding downstream 54708 19340216 ~ 19366538 (-)
XLOC_037740 AL935292.1 coding downstream 73007 19348124 ~ 19348239 (-)
XLOC_037738 pou1f1 coding downstream 259264 19132885 ~ 19161982 (-)
XLOC_037737 crfb2 coding downstream 328924 19073556 ~ 19092322 (-)
XLOC_037736 CR361551.2 coding downstream 352082 19052374 ~ 19069164 (-)
XLOC_037742 FP017279.1 coding upstream 46897 19468769 ~ 19471475 (-)
XLOC_037743 wdr4 coding upstream 55815 19477687 ~ 19489264 (-)
XLOC_037744 tmprss3a coding upstream 128495 19550367 ~ 19585848 (-)
XLOC_037745 fgf9 coding upstream 182995 19604867 ~ 19610436 (-)
XLOC_037746 NA coding upstream 232834 19654706 ~ 19658313 (-)
XLOC_037734 NA non-coding downstream 380219 19027152 ~ 19041027 (-)
XLOC_037735 CR361551.3 non-coding downstream 391779 19029353 ~ 19029467 (-)
XLOC_037732 NA non-coding downstream 509531 18908203 ~ 18911715 (-)
XLOC_037729 NA non-coding downstream 696790 18720676 ~ 18724456 (-)
XLOC_037748 BX677668.2 non-coding upstream 293710 19715582 ~ 19716857 (-)
XLOC_037749 BX677668.1 non-coding upstream 328479 19750351 ~ 19756102 (-)
XLOC_037750 NA non-coding upstream 349903 19771775 ~ 19773421 (-)

Expression


Co-expression Network