G1882819


Basic Information

Item Value
gene id G1882819
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56471375 ~ 56480266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2153864
ctctctcagtctgtaaccatggtctctctctcagtctgtaacgTGAATGAACATATGaggtaaccatggtctctcttagtcagtaaccatggtctctctcagtctgtaaccatggtctctctctgtctgtaaccatggtctcactctcagtctgtaaccatggtctctctctcagtctgtaaccaTGGTTTCTCTCTcaatcagtaaccatggtctctctcagtctgtaaccatggtctctctctcagtctgtaaccatggtctctctcttagtctgtaaccatggtgtctctctcagtctgtaaccatggtctctctctcagtcagtaaccatggtgtctctctcagtctctaaccatggtgtctctctcagtc

Function

NR:

description
PREDICTED: P30 adhesin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2153864 True 375 lncRNA 0.46 4 56471375 56480266

Neighbor

gene id symbol gene type direction distance location
LOC110502999 NA coding upstream 430021 55985543 ~ 56041354 (+)
LOC110502997 LOC106610965 coding upstream 532790 55935205 ~ 55938585 (+)
dync2li1 dync2li1 coding upstream 1289171 55173043 ~ 55182204 (+)
LOC110502992 LOC106610889 coding upstream 1301836 55071188 ~ 55169539 (+)
LOC118943891 NA coding upstream 1508637 54950534 ~ 54962738 (+)
LOC110503001 LOC106611028 coding downstream 132800 56613066 ~ 56727194 (+)
LOC118943924 NA coding downstream 222465 56701366 ~ 56709966 (+)
LOC110503003 LOC106611055 coding downstream 332138 56812404 ~ 56828732 (+)
LOC110503004 LOC106611018 coding downstream 348790 56829056 ~ 56843475 (+)
LOC118943926 NA coding downstream 898863 57379129 ~ 57399437 (+)
G1882760 NA non-coding upstream 123952 56347166 ~ 56347423 (+)
G1882750 NA non-coding upstream 147323 56323685 ~ 56324052 (+)
G1882722 NA non-coding upstream 197514 56273651 ~ 56273861 (+)
G1882601 NA non-coding upstream 352502 56118640 ~ 56118873 (+)
G1882477 NA non-coding upstream 416959 56054000 ~ 56054416 (+)
G1882691 NA non-coding downstream 46826 56527092 ~ 56529013 (+)
G1882843 NA non-coding downstream 79156 56559422 ~ 56560072 (+)
G1882844 NA non-coding downstream 81366 56561632 ~ 56562512 (+)
G1882845 NA non-coding downstream 82436 56562702 ~ 56564506 (+)
G1882693 NA non-coding downstream 166905 56647171 ~ 56647988 (+)
G1881371 NA other upstream 1467703 55002782 ~ 55003672 (+)
G1879958 NA other upstream 2615645 53851671 ~ 53855730 (+)
LOC118943904 NA other upstream 3071088 53398184 ~ 53400297 (+)
G1879582 NA other upstream 3093189 53377810 ~ 53378186 (+)
G1878894 LOC106610502 other upstream 3610740 52857868 ~ 52860635 (+)
G1882830 NA other downstream 49529 56529795 ~ 56538483 (+)
G1882831 NA other downstream 53351 56533617 ~ 56543256 (+)
G1883457 NA other downstream 531771 57012037 ~ 57013218 (+)
G1885587 NA other downstream 2381948 58862214 ~ 58864502 (+)

Expression


Co-expression Network