G1882883


Basic Information

Item Value
gene id G1882883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56671460 ~ 56671845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2153935
TTTGAAGATTATGCAGGCATCATTGGGAGAGTTTAGAGCTCTCTACTGTACTTAACACCCAAATCCACATCACGCAGAGATAAAAACACATTGAAACTCACATCACTCAGAGGTAAAAACACATCACTCAGAGGTAAAAACACATTGAAACCCACATCACTCAGAGGTAAAAACACATCACTCAGAGATAAAAACACATTGAAACCCAAATCACTCAATCGCATAAACAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2153935 True 233 lncRNA 0.38 2 56671460 56671845

Neighbor

gene id symbol gene type direction distance location
LOC110503000 prkce coding upstream 60702 56311640 ~ 56610758 (+)
LOC110502999 NA coding upstream 630106 55985543 ~ 56041354 (+)
LOC110502997 LOC106610965 coding upstream 732875 55935205 ~ 55938585 (+)
dync2li1 dync2li1 coding upstream 1489256 55173043 ~ 55182204 (+)
LOC110502992 LOC106610889 coding upstream 1501921 55071188 ~ 55169539 (+)
LOC118943924 NA coding downstream 30886 56701366 ~ 56709966 (+)
LOC110503003 LOC106611055 coding downstream 140559 56812404 ~ 56828732 (+)
LOC110503004 LOC106611018 coding downstream 157211 56829056 ~ 56843475 (+)
LOC118943926 NA coding downstream 707284 57379129 ~ 57399437 (+)
LOC110503012 LOC106611138 coding downstream 827849 57499694 ~ 57540368 (+)
G1882693 NA non-coding upstream 23472 56647171 ~ 56647988 (+)
G1882845 NA non-coding upstream 106954 56562702 ~ 56564506 (+)
G1882844 NA non-coding upstream 108948 56561632 ~ 56562512 (+)
G1882843 NA non-coding upstream 111388 56559422 ~ 56560072 (+)
G1882691 NA non-coding upstream 142447 56527092 ~ 56529013 (+)
G1882884 NA non-coding downstream 716 56672561 ~ 56672944 (+)
G1882891 NA non-coding downstream 22921 56694766 ~ 56695155 (+)
G1882901 NA non-coding downstream 56405 56728250 ~ 56728466 (+)
G1882902 NA non-coding downstream 56778 56728623 ~ 56765655 (+)
G1882831 NA other upstream 128204 56533617 ~ 56543256 (+)
G1882830 NA other upstream 132977 56529795 ~ 56538483 (+)
G1881371 NA other upstream 1667788 55002782 ~ 55003672 (+)
G1879958 NA other upstream 2815730 53851671 ~ 53855730 (+)
LOC118943904 NA other upstream 3271173 53398184 ~ 53400297 (+)
LOC110503001 LOC106611028 other downstream 1403 56613066 ~ 56727194 (+)
G1883457 NA other downstream 340192 57012037 ~ 57013218 (+)
G1885587 NA other downstream 2190369 58862214 ~ 58864502 (+)
G1886557 NA other downstream 3052419 59724264 ~ 59736661 (+)
G1886558 NA other downstream 3055901 59727746 ~ 59736471 (+)

Expression


Co-expression Network