G1883414


Basic Information

Item Value
gene id G1883414
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56935431 ~ 56935773 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2154575
gttatagtctaacgaccagttagaggggagatgttctaggttatagtctaatgaccagttacagtagaggggaggtgtacTTGGTTATAGTCTAATGGCCAGTTACAGTAGTGGGGAGGTGTTCttggttatagtctaatgaccagttacagtagaggggaggtgttctaggttatagtctaatgaccagttagagtagaggggatgtgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2154575 True 211 lncRNA 0.43 2 56935431 56935773

Neighbor

gene id symbol gene type direction distance location
LOC110503004 LOC106611018 coding upstream 91956 56829056 ~ 56843475 (+)
LOC110503003 LOC106611055 coding upstream 106699 56812404 ~ 56828732 (+)
LOC118943924 NA coding upstream 225465 56701366 ~ 56709966 (+)
LOC110503001 LOC106611028 coding upstream 234447 56613066 ~ 56727194 (+)
LOC110503000 prkce coding upstream 324673 56311640 ~ 56610758 (+)
LOC118943926 NA coding downstream 443356 57379129 ~ 57399437 (+)
LOC110503012 LOC106611138 coding downstream 563921 57499694 ~ 57540368 (+)
LOC110503013 NA coding downstream 609502 57545275 ~ 57550796 (+)
LOC110503040 LOC106579579 coding downstream 634973 57570746 ~ 57588495 (+)
LOC118943835 NA coding downstream 1928842 58864615 ~ 58865931 (+)
G1883412 NA non-coding upstream 205 56924307 ~ 56935226 (+)
G1883413 NA non-coding upstream 3090 56931278 ~ 56932341 (+)
G1883408 NA non-coding upstream 32403 56902157 ~ 56903028 (+)
G1883403 NA non-coding upstream 37854 56897082 ~ 56897577 (+)
G1882902 NA non-coding upstream 169776 56728623 ~ 56765655 (+)
G1883423 LOC106610997 non-coding downstream 11891 56947664 ~ 56956691 (+)
G1883453 NA non-coding downstream 68304 57004077 ~ 57004677 (+)
G1883460 NA non-coding downstream 79953 57015726 ~ 57016552 (+)
G1883465 NA non-coding downstream 86448 57022221 ~ 57054805 (+)
G1883482 NA non-coding downstream 122597 57058370 ~ 57058976 (+)
G1882831 NA other upstream 392175 56533617 ~ 56543256 (+)
G1882830 NA other upstream 396948 56529795 ~ 56538483 (+)
G1881371 NA other upstream 1931759 55002782 ~ 55003672 (+)
G1879958 NA other upstream 3079701 53851671 ~ 53855730 (+)
G1883457 NA other downstream 76264 57012037 ~ 57013218 (+)
G1885587 NA other downstream 1926441 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2788491 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2791973 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2813945 59749718 ~ 59786095 (+)

Expression


Co-expression Network