G1883881


Basic Information

Item Value
gene id G1883881
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57561736 ~ 57562058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155092
cgcagccgtcataccgctcaggaaggagacgcattctgtctcctagagatgaatgtactttgatgcaaaaagtgcaaatcaatcccagaacaacagcaaagaaccttgtgaagatgctggaggaaacaggtaaaaagtatctatatccacagtaaaacgagtccaatatcgacataacctgaaaggctgctctgcagactacagtttgcaactgcacatggggacaaagatggtactttttggagaaaggttctctggtctgatgaaacaaaaatataaatgtttggccataatgaccatcgttatgtttggaggaaaaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155092 True 323 lncRNA 0.42 1 57561736 57562058

Neighbor

gene id symbol gene type direction distance location
LOC110503013 NA coding upstream 10940 57545275 ~ 57550796 (+)
LOC110503012 LOC106611138 coding upstream 21368 57499694 ~ 57540368 (+)
LOC118943926 NA coding upstream 162299 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 718261 56829056 ~ 56843475 (+)
LOC110503003 LOC106611055 coding upstream 733004 56812404 ~ 56828732 (+)
LOC110503040 LOC106579579 coding downstream 8688 57570746 ~ 57588495 (+)
LOC118943835 NA coding downstream 1302557 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 1774405 59336463 ~ 59345077 (+)
LOC118943836 NA coding downstream 2019041 59581099 ~ 59581875 (+)
LOC110503016 LOC106611257 coding downstream 2141336 59703394 ~ 59816421 (+)
G1883879 NA non-coding upstream 2468 57559060 ~ 57559268 (+)
G1883863 NA non-coding upstream 65589 57495920 ~ 57496147 (+)
G1883850 NA non-coding upstream 87504 57473996 ~ 57474232 (+)
G1883849 NA non-coding upstream 88341 57473168 ~ 57473395 (+)
G1883848 NA non-coding upstream 90094 57471348 ~ 57471642 (+)
G1884093 NA non-coding downstream 27987 57590045 ~ 57590267 (+)
G1884095 NA non-coding downstream 31102 57593160 ~ 57593406 (+)
G1884099 NA non-coding downstream 34488 57596546 ~ 57596777 (+)
G1884173 NA non-coding downstream 109819 57671877 ~ 57676345 (+)
G1884203 NA non-coding downstream 143376 57705434 ~ 57724679 (+)
G1883457 NA other upstream 548518 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 834542 56613066 ~ 56727194 (+)
G1882831 NA other upstream 1018480 56533617 ~ 56543256 (+)
G1882830 NA other upstream 1023253 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2558064 55002782 ~ 55003672 (+)
G1885587 NA other downstream 1300156 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2162206 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2165688 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2187660 59749718 ~ 59786095 (+)
G1886561 NA other downstream 2221928 59783986 ~ 59787989 (+)

Expression


Co-expression Network