G1884093


Basic Information

Item Value
gene id G1884093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57590045 ~ 57590267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2155329
GCACGTGTTGACATTACTATAAGCTACCAATGCATCAGACTTAAGGTAAATACAAACTGGCCTATAAAATGTACACATGCAAACTGACCTTCCCCTTTAAAATGTACACATATACAAACGGGCCTTCCCCTTTAAAATGTACACAAGGAAAAATACAGTATTAGCAATGAAAAGGTTGTGCTATAACTTGTTGGGCTCCAATCTGCCACAtcaagttacaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2155329 True 223 lncRNA 0.38 1 57590045 57590267

Neighbor

gene id symbol gene type direction distance location
LOC110503040 LOC106579579 coding upstream 1550 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 39249 57545275 ~ 57550796 (+)
LOC110503012 LOC106611138 coding upstream 49677 57499694 ~ 57540368 (+)
LOC118943926 NA coding upstream 190608 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 746570 56829056 ~ 56843475 (+)
LOC118943835 NA coding downstream 1274348 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 1746196 59336463 ~ 59345077 (+)
LOC118943836 NA coding downstream 1990832 59581099 ~ 59581875 (+)
LOC110503016 LOC106611257 coding downstream 2113127 59703394 ~ 59816421 (+)
LOC110503015 LOC106589751 coding downstream 2256844 59847111 ~ 59866775 (+)
G1883881 NA non-coding upstream 27987 57561736 ~ 57562058 (+)
G1883879 NA non-coding upstream 30777 57559060 ~ 57559268 (+)
G1883863 NA non-coding upstream 93898 57495920 ~ 57496147 (+)
G1883850 NA non-coding upstream 115813 57473996 ~ 57474232 (+)
G1883849 NA non-coding upstream 116650 57473168 ~ 57473395 (+)
G1884095 NA non-coding downstream 2893 57593160 ~ 57593406 (+)
G1884099 NA non-coding downstream 6279 57596546 ~ 57596777 (+)
G1884173 NA non-coding downstream 81610 57671877 ~ 57676345 (+)
G1884203 NA non-coding downstream 115167 57705434 ~ 57724679 (+)
G1884209 NA non-coding downstream 122648 57712915 ~ 57720551 (+)
G1883457 NA other upstream 576827 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 862851 56613066 ~ 56727194 (+)
G1882831 NA other upstream 1046789 56533617 ~ 56543256 (+)
G1882830 NA other upstream 1051562 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2586373 55002782 ~ 55003672 (+)
G1885587 NA other downstream 1271947 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2133997 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2137479 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2159451 59749718 ~ 59786095 (+)
G1886561 NA other downstream 2193719 59783986 ~ 59787989 (+)

Expression


Co-expression Network