G1884854


Basic Information

Item Value
gene id G1884854
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 58578016 ~ 58578816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2156163
tcagcctccagtatttatgctgcagtagtttgtgtcggggggctagggtcagtttgttatatctggagtacttctcctgtcctattcggtgtcctgtgtgaatctaagtgtgcgttctcgaattctctccttctctctttctctctctcagaggacctgagccctaggaccatgccccaggactacctgacatgatgagtccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2156163 True 297 lncRNA 0.48 2 58578016 58578816

Neighbor

gene id symbol gene type direction distance location
LOC110503040 LOC106579579 coding upstream 989521 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 1027220 57545275 ~ 57550796 (+)
LOC110503012 LOC106611138 coding upstream 1037648 57499694 ~ 57540368 (+)
LOC118943926 NA coding upstream 1178579 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 1734541 56829056 ~ 56843475 (+)
LOC118943835 NA coding downstream 285799 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 757647 59336463 ~ 59345077 (+)
LOC118943836 NA coding downstream 1002283 59581099 ~ 59581875 (+)
LOC110503016 LOC106611257 coding downstream 1124578 59703394 ~ 59816421 (+)
LOC110503015 LOC106589751 coding downstream 1268295 59847111 ~ 59866775 (+)
G1884794 NA non-coding upstream 80599 58490993 ~ 58497417 (+)
G1884631 NA non-coding upstream 334507 58235100 ~ 58243509 (+)
G1884583 NA non-coding upstream 452321 58124895 ~ 58125695 (+)
G1884501 NA non-coding upstream 532150 57985494 ~ 58045866 (+)
G1884440 NA non-coding upstream 675629 57902140 ~ 57902387 (+)
G1885525 NA non-coding downstream 226528 58805344 ~ 58805580 (+)
G1885551 NA non-coding downstream 251186 58830002 ~ 58830958 (+)
G1885564 NA non-coding downstream 265717 58844533 ~ 58844811 (+)
G1885605 NA non-coding downstream 296328 58875144 ~ 58875461 (+)
G1885607 NA non-coding downstream 296705 58875521 ~ 58875844 (+)
G1883457 NA other upstream 1564798 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 1850822 56613066 ~ 56727194 (+)
G1882831 NA other upstream 2034760 56533617 ~ 56543256 (+)
G1882830 NA other upstream 2039533 56529795 ~ 56538483 (+)
G1881371 NA other upstream 3574344 55002782 ~ 55003672 (+)
G1885587 NA other downstream 283398 58862214 ~ 58864502 (+)
G1886557 NA other downstream 1145448 59724264 ~ 59736661 (+)
G1886558 NA other downstream 1148930 59727746 ~ 59736471 (+)
G1886560 NA other downstream 1170902 59749718 ~ 59786095 (+)
G1886561 NA other downstream 1205170 59783986 ~ 59787989 (+)

Expression


Co-expression Network