G1885551


Basic Information

Item Value
gene id G1885551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 58830002 ~ 58830958 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2156940
GGCTCAATACAGGCTGCAGTATAGGCTCAATACAGGCTGCAGTATAGGCTCAGTTCTAGCTGCAGTATAGGCTCAATACAGGCTGCAGTACAGGTTCAATACAGGCTGCAGGACAGGCTCATTACAGGCTGCAGTACAGGCTCAATACTGGCTGAAGTACAGGCTCAGTACAGGCTGCAGTACAGGCCGCAGTATAGACTCAATACAGGCTGCAATATAGGCTCAATACAGGCTGCAGTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2156940 True 242 lncRNA 0.50 2 58830002 58830958

Neighbor

gene id symbol gene type direction distance location
LOC110503040 LOC106579579 coding upstream 1241507 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 1279206 57545275 ~ 57550796 (+)
LOC110503012 LOC106611138 coding upstream 1289634 57499694 ~ 57540368 (+)
LOC118943926 NA coding upstream 1430565 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 1986527 56829056 ~ 56843475 (+)
LOC118943835 NA coding downstream 33657 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 505505 59336463 ~ 59345077 (+)
LOC118943836 NA coding downstream 750141 59581099 ~ 59581875 (+)
LOC110503016 LOC106611257 coding downstream 872436 59703394 ~ 59816421 (+)
LOC110503015 LOC106589751 coding downstream 1016153 59847111 ~ 59866775 (+)
G1885525 NA non-coding upstream 24422 58805344 ~ 58805580 (+)
G1884854 NA non-coding upstream 251186 58578016 ~ 58578816 (+)
G1884794 NA non-coding upstream 332585 58490993 ~ 58497417 (+)
G1884631 NA non-coding upstream 586493 58235100 ~ 58243509 (+)
G1884583 NA non-coding upstream 704307 58124895 ~ 58125695 (+)
G1885564 NA non-coding downstream 13575 58844533 ~ 58844811 (+)
G1885605 NA non-coding downstream 44186 58875144 ~ 58875461 (+)
G1885607 NA non-coding downstream 44563 58875521 ~ 58875844 (+)
G1885626 NA non-coding downstream 70895 58901853 ~ 58902137 (+)
G1885629 NA non-coding downstream 72149 58903107 ~ 58903355 (+)
G1883457 NA other upstream 1816784 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 2102808 56613066 ~ 56727194 (+)
G1882831 NA other upstream 2286746 56533617 ~ 56543256 (+)
G1882830 NA other upstream 2291519 56529795 ~ 56538483 (+)
G1881371 NA other upstream 3826330 55002782 ~ 55003672 (+)
G1885587 NA other downstream 31256 58862214 ~ 58864502 (+)
G1886557 NA other downstream 893306 59724264 ~ 59736661 (+)
G1886558 NA other downstream 896788 59727746 ~ 59736471 (+)
G1886560 NA other downstream 918760 59749718 ~ 59786095 (+)
G1886561 NA other downstream 953028 59783986 ~ 59787989 (+)

Expression


Co-expression Network