G1886562


Basic Information

Item Value
gene id G1886562
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59768276 ~ 59788630 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158074
tgtcagtgtgttagacattaTGACAAAgattagtgtcagtgtgttggacatgatgaccaggatcattgtcagtgtgttggatatgatgaccagaatcagtgtcagtgtgttggacttgATGAccgggatcagtgtcagtgtgttggacatgaccaggctcagtgttagtgtgttgtacatgatgaccaggctcagtgtcagtatgttggacatgatctgaatcagtgtcagtgtgttggacATTACTAGGCTCAGCGTCAGtttgttggacatgatgaccagtctcagtgtctgtgtgtatgacattatgaccaggctcagtgtcagtgtgttggacatgatgacc

Function

NR:

description
PREDICTED: ZZ-type zinc finger-containing protein 3-like, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158074 True 346 lncRNA 0.45 2 59768276 59788630

Neighbor

gene id symbol gene type direction distance location
LOC118943836 NA coding upstream 186401 59581099 ~ 59581875 (+)
LOC110503019 LOC106611219 coding upstream 423199 59336463 ~ 59345077 (+)
LOC118943835 NA coding upstream 902345 58864615 ~ 58865931 (+)
LOC110503040 LOC106579579 coding upstream 2179781 57570746 ~ 57588495 (+)
LOC110503013 NA coding upstream 2217480 57545275 ~ 57550796 (+)
LOC110503015 LOC106589751 coding downstream 58481 59847111 ~ 59866775 (+)
LOC110503042 kcnk1 coding downstream 173585 59962215 ~ 59972534 (+)
slc35f3b slc35f3 coding downstream 224075 60012705 ~ 60174129 (+)
col9a1b LOC106560234 coding downstream 536659 60325289 ~ 60371061 (+)
LOC110516668 lmbrd1 coding downstream 857436 60646066 ~ 60907352 (+)
G1886556 NA non-coding upstream 45472 59716295 ~ 59722804 (+)
G1886548 NA non-coding upstream 68215 59699848 ~ 59700061 (+)
G1886539 NA non-coding upstream 75521 59692493 ~ 59692755 (+)
G1886538 NA non-coding upstream 75798 59692255 ~ 59692478 (+)
G1886482 NA non-coding upstream 140308 59627751 ~ 59627968 (+)
G1886570 NA non-coding downstream 9992 59798622 ~ 59798998 (+)
G1886615 NA non-coding downstream 28794 59817424 ~ 59817690 (+)
G1886620 NA non-coding downstream 34657 59823287 ~ 59823625 (+)
G1886645 NA non-coding downstream 187518 59976148 ~ 59976670 (+)
G1886557 NA other upstream 31615 59724264 ~ 59736661 (+)
G1886558 NA other upstream 31805 59727746 ~ 59736471 (+)
G1885587 NA other upstream 903774 58862214 ~ 58864502 (+)
G1883457 NA other upstream 2755058 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 3041082 56613066 ~ 56727194 (+)
G1887835 NA other downstream 1488145 61276775 ~ 61277763 (+)
G1888298 NA other downstream 2138116 61926746 ~ 61927857 (+)
G1888544 NA other downstream 2775895 62564525 ~ 62565083 (+)

Expression


Co-expression Network