G1886615


Basic Information

Item Value
gene id G1886615
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59817424 ~ 59817690 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158134
GCACGGCGCGCTGAAGGTGAACATGGGTGGCGTCCCATGTTTCCTCCACGCACCAGAACCAGTCGGCCACCGCAGGAGCTTTAGTCTgcctctgatgccaaggagccagaacggCTGATAACCCAATACACACTGGAAGGGGGAGAGTTTAGTGGAagagtggcggagcgagttctgggccatctctgcccagggcacaaacgctgcccactcccccggccggtcctggcaataggaccttagaaacttacccacatcctggttaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158134 True 267 lncRNA 0.59 1 59817424 59817690

Neighbor

gene id symbol gene type direction distance location
LOC110503016 LOC106611257 coding upstream 1003 59703394 ~ 59816421 (+)
LOC118943836 NA coding upstream 235549 59581099 ~ 59581875 (+)
LOC110503019 LOC106611219 coding upstream 472347 59336463 ~ 59345077 (+)
LOC118943835 NA coding upstream 951493 58864615 ~ 58865931 (+)
LOC110503040 LOC106579579 coding upstream 2228929 57570746 ~ 57588495 (+)
LOC110503015 LOC106589751 coding downstream 29421 59847111 ~ 59866775 (+)
LOC110503042 kcnk1 coding downstream 144525 59962215 ~ 59972534 (+)
slc35f3b slc35f3 coding downstream 195015 60012705 ~ 60174129 (+)
col9a1b LOC106560234 coding downstream 507599 60325289 ~ 60371061 (+)
LOC110516668 lmbrd1 coding downstream 828376 60646066 ~ 60907352 (+)
G1886570 NA non-coding upstream 18426 59798622 ~ 59798998 (+)
G1886562 NA non-coding upstream 28794 59768276 ~ 59788630 (+)
G1886556 NA non-coding upstream 94620 59716295 ~ 59722804 (+)
G1886548 NA non-coding upstream 117363 59699848 ~ 59700061 (+)
G1886539 NA non-coding upstream 124669 59692493 ~ 59692755 (+)
G1886620 NA non-coding downstream 5597 59823287 ~ 59823625 (+)
G1886645 NA non-coding downstream 158458 59976148 ~ 59976670 (+)
G1886685 NA non-coding downstream 168645 59986335 ~ 59987088 (+)
G1886689 NA non-coding downstream 172637 59990327 ~ 59990543 (+)
G1886561 NA other upstream 29435 59783986 ~ 59787989 (+)
G1886560 NA other upstream 31329 59749718 ~ 59786095 (+)
G1886557 NA other upstream 80763 59724264 ~ 59736661 (+)
G1886558 NA other upstream 80953 59727746 ~ 59736471 (+)
G1885587 NA other upstream 952922 58862214 ~ 58864502 (+)
G1887835 NA other downstream 1459085 61276775 ~ 61277763 (+)
G1888298 NA other downstream 2109056 61926746 ~ 61927857 (+)
G1888544 NA other downstream 2746835 62564525 ~ 62565083 (+)

Expression


Co-expression Network