G1886685


Basic Information

Item Value
gene id G1886685
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59986335 ~ 59987088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158216
cctaccaattaggatctggataaaaatacttgaatcagttatagaacccattgtcctttatacctaccaataattcacaaaatgggacaaacaccaaattgagactgcatgcagaattctgtaaaAATATAATCGGTgcacaacgtaaaacaccaaatagtgcatgcagagcagaattaggctgatacccgctAACTTTCTAAATCCAGAAAttagacgttaaattctacaaccacctaaaagtaagctattcccaaaccttccacaacaaagccatcacctacagagaaattaacctggagaagagtccctcaagcaagctggtcctggagctcGGTTCACGAACACAAACAGACCCAACAgacccccaggacagcaacacaattagacccaatcaaatcaagAGAAAACAataagataattacttaacacattggaaagaatttaccaaaaaactgatcaaactagaatgctatttggccctaaacagagagtacacagtggcagaatacctgaccactgtgactgacccaaaaataaggaaatctttgactatgtacagactcagtgagcatagccttgctattgagaaatgcCATCGAATTCAGACCtgtctctcaagagaagacaggctatgtgcacactgcccacaaaatgaggtggaaactgagctgcacttcctaacctcctgccaaatgtatgaccatattagagacacatatttcccacagatccacaaagaatttgaaaacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158216 True 754 lncRNA 0.40 1 59986335 59987088

Neighbor

gene id symbol gene type direction distance location
LOC110503042 kcnk1 coding upstream 13801 59962215 ~ 59972534 (+)
LOC110503015 LOC106589751 coding upstream 119560 59847111 ~ 59866775 (+)
LOC110503016 LOC106611257 coding upstream 169914 59703394 ~ 59816421 (+)
LOC118943836 NA coding upstream 404460 59581099 ~ 59581875 (+)
LOC110503019 LOC106611219 coding upstream 641258 59336463 ~ 59345077 (+)
slc35f3b slc35f3 coding downstream 25617 60012705 ~ 60174129 (+)
col9a1b LOC106560234 coding downstream 338201 60325289 ~ 60371061 (+)
LOC110516668 lmbrd1 coding downstream 658978 60646066 ~ 60907352 (+)
LOC118943928 LOC106577473 coding downstream 1506569 61493657 ~ 61522049 (+)
LOC118943929 LOC106577282 coding downstream 1554064 61541152 ~ 61555170 (+)
G1886645 NA non-coding upstream 9665 59976148 ~ 59976670 (+)
G1886620 NA non-coding upstream 162710 59823287 ~ 59823625 (+)
G1886615 NA non-coding upstream 168645 59817424 ~ 59817690 (+)
G1886570 NA non-coding upstream 187337 59798622 ~ 59798998 (+)
G1886689 NA non-coding downstream 3239 59990327 ~ 59990543 (+)
G1886728 NA non-coding downstream 97603 60084691 ~ 60084897 (+)
G1886731 NA non-coding downstream 102698 60089786 ~ 60090030 (+)
G1886737 NA non-coding downstream 111781 60098869 ~ 60099165 (+)
G1886739 NA non-coding downstream 115025 60102113 ~ 60102363 (+)
G1886561 NA other upstream 198346 59783986 ~ 59787989 (+)
G1886560 NA other upstream 200240 59749718 ~ 59786095 (+)
G1886557 NA other upstream 249674 59724264 ~ 59736661 (+)
G1886558 NA other upstream 249864 59727746 ~ 59736471 (+)
G1885587 NA other upstream 1121833 58862214 ~ 58864502 (+)
G1887835 NA other downstream 1289687 61276775 ~ 61277763 (+)
G1888298 NA other downstream 1939658 61926746 ~ 61927857 (+)
G1888544 NA other downstream 2577437 62564525 ~ 62565083 (+)

Expression


Co-expression Network