G1886689


Basic Information

Item Value
gene id G1886689
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59990327 ~ 59990543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2158220
ctttgctatgagaccctttgctattagctcaggtccatcctgtttccattgaacatccttgagatgtttctacaacttgattgaagtccacctgtggtaaattcaattgattgggcacacacctgtctatataaggtcccacagttgacagtgcacgtcagagcaaaaaccaagccatgaggtcgaaggaattgtccgtagagctacgagtcaggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2158220 True 217 lncRNA 0.45 1 59990327 59990543

Neighbor

gene id symbol gene type direction distance location
LOC110503042 kcnk1 coding upstream 17793 59962215 ~ 59972534 (+)
LOC110503015 LOC106589751 coding upstream 123552 59847111 ~ 59866775 (+)
LOC110503016 LOC106611257 coding upstream 173906 59703394 ~ 59816421 (+)
LOC118943836 NA coding upstream 408452 59581099 ~ 59581875 (+)
LOC110503019 LOC106611219 coding upstream 645250 59336463 ~ 59345077 (+)
slc35f3b slc35f3 coding downstream 22162 60012705 ~ 60174129 (+)
col9a1b LOC106560234 coding downstream 334746 60325289 ~ 60371061 (+)
LOC110516668 lmbrd1 coding downstream 655523 60646066 ~ 60907352 (+)
LOC118943928 LOC106577473 coding downstream 1503114 61493657 ~ 61522049 (+)
LOC118943929 LOC106577282 coding downstream 1550609 61541152 ~ 61555170 (+)
G1886685 NA non-coding upstream 3239 59986335 ~ 59987088 (+)
G1886645 NA non-coding upstream 13657 59976148 ~ 59976670 (+)
G1886620 NA non-coding upstream 166702 59823287 ~ 59823625 (+)
G1886615 NA non-coding upstream 172637 59817424 ~ 59817690 (+)
G1886728 NA non-coding downstream 94148 60084691 ~ 60084897 (+)
G1886731 NA non-coding downstream 99243 60089786 ~ 60090030 (+)
G1886737 NA non-coding downstream 108326 60098869 ~ 60099165 (+)
G1886739 NA non-coding downstream 111570 60102113 ~ 60102363 (+)
G1886740 NA non-coding downstream 112335 60102878 ~ 60103410 (+)
G1886561 NA other upstream 202338 59783986 ~ 59787989 (+)
G1886560 NA other upstream 204232 59749718 ~ 59786095 (+)
G1886557 NA other upstream 253666 59724264 ~ 59736661 (+)
G1886558 NA other upstream 253856 59727746 ~ 59736471 (+)
G1885587 NA other upstream 1125825 58862214 ~ 58864502 (+)
G1887835 NA other downstream 1286232 61276775 ~ 61277763 (+)
G1888298 NA other downstream 1936203 61926746 ~ 61927857 (+)
G1888544 NA other downstream 2573982 62564525 ~ 62565083 (+)

Expression


Co-expression Network