XLOC_037948 (dnajb11)


Basic Information

Item Value
gene id XLOC_037948
gene name dnajb11
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 32641026 ~ 32648725 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074485
GACTGACTTTTATAACACTTCCTTTCTGAACCTGGGCGGGGATTTGTGACAGAGCAGGAAGAGGCTTTTTGATAGACATCACAGAAAGCCGGTGTGTTTTACTGGACTTCTGAAGGAAACAAGGACCCATGGCTATTAGAGGAATGAAATTGTCGAGTGTCTGttttctgcttttatatttgataCTGACCGTATTTGCAGGgagGGATTTCTACAAAATTCTAGGGGTTAGTAGATCAGCATCAGTCAAAGACATTAAGAAAGCCTACAGAAAGTTGGCATTGCAGCTTCATCCAGACAGAAACCAAGATGACCCAAATGCCCAAGACAAATTTGCAGACCTTGGAGCTGCTTACGAGGTACTTTCAGATGAGGAGAAAAGGAAACAGTATGACGCATATGGAGAGGAGGGATTAAAAGAAGGCCATCAAAGTTCACATGGTGATATATTCTCCAGTTTCTTTGGCGACTTTGGATTTATGTTTGGTGGAAATAGACAGCCAGCTGGCAGAGATATTCCAAGGGGTAATGACATTGTACTGGACCTTGAAGTAACATTAGAAGAGGTGTATTCAGGGAATTTTGTGGAGGTGGTACGAATCAAACCGGTAGCAAAAGAAGCTCCAGGCAAAAGAAAATGCAACTGCCGGCAAGAAATGAGAACAACACAACTCGGACCGGGTCGCTTTCAGATGACACAGGAAGTAGTCTGTGATGAATGccccaatattaaACTTGTGAATGAGGAGAGAACACTAGAGGTGGAGATCGAGCAGGGTGTGCGAGATGAAATGGAGTATCCTTTCATCGGAGAGGGTGAACCTCACATTGACGGTGAGCCTGGAGATCTGCGTTTCCGCATCAAAGTTTTAAAGCATCCAGTGTTTGAGCGCAGAGGTGACGACCTTTACACAAACGTCACCATCTCTCTGGTAGAGGCTCTGGTCGGTTTTGAGATGGACATCACTCATTTAGATGGCCACAAGGTGCATATTGTCAGAGATAAAATCACTAAACCAGGATCTCGTATTTGGAAGAAGGGTGAGGGCCTACCAAGTTTTGACAACAACAATATTCGTGGATCGCTCATAATCACCTTTGATGTAGATTTTCCCAAGGAGCAACTTGATGACCAGCAGAAAGATGGTATAAAACAGCTTTTGAAACAGGCACCATCTCAAAAGGTTTATAACGGACTACAGGGATACTGACAGACTAGCCAAGTAAATCAGGACTGAATGCGTGAACCTTTctgccctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaattcaaatGCACACAGAGGAACAAGCAATGGggtgtatttatttttcatattgttcTCAGGAAGGGTTGAcgttaaagtttttatttttttttatgatttctttttcctgatttaagtttttaaatgccTTGTTTTGTCATAAAAAGTAGTTTTATTTGACCCCCCCAAAATGATAACTTTCTCTTTATATGGTCCACAGTTTCAGTAAGtagtttaaaacctttttcatCAGTTGAATGTTTGAATGCTACTTTTCTGTTCTGACCAGTCAACCACCATCCACTCATGGATCAGCATAATGTTTAGTGCCAGTTGATTTGAGACCTGCAGCAGCaacaacagaaagaaagaaagaggactGAAACTTCAAACCAGAGGACAATTTAAATACCTGCAACTCAAGAACTTACTCTCCaagtcttttaaaaaaagaaacaattattTGAACGGAAGTTCACTGAACGTTCTCAATTTAGACTCTTCAGTCTTTGGTCCACTTGTTTTAAGGAACAAATTTATTACGGTTGTTGCAGCTGGTGTTTTTGTCCTCACCAAGCTGCAaatcctgtttgtttgtttgtgtgtattgcTCCACTACTGCCTGGTTCAGATTTGCCGCCTGGATACAGATTCAGTTTCCTCTAAGGCACTTATTTGGTTTTTGAAGTTCCAACAGAAGACCTCTTTAACTGTACAGTTCAACTCTttcctgtgatttattttttatcatttttttatgtgACGGATTCActttcatgtttctttaacaGCCCCTCCTGATGTTCGGTCCATTAGGTCTGTTTCTAGTTAGTCATTTTCCTTTGCTCTTTGTGGACTGCACCAGACAAATCAGAACAACTTAGGATAACTTGTGCACTAGTGAAGGAAATATCATCTGCCATATTCAAAAGAGAATTAAAAGTTTATAATTATGGTTAAAAACTGACTTTATAAGAGACAAGA

Function

symbol description
dnajb11 Predicted to enable unfolded protein binding activity. Predicted to act upstream of or within protein folding. Is expressed in several structures, including axial mesoderm; blood vessel; nervous system; neural tube; and pectoral fin. Human ortholog(s) of this gene implicated in polycystic kidney disease. Orthologous to human DNAJB11 (DnaJ heat shock protein family (Hsp40) member B11).

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
ko04141 Protein processing in endoplasmic reticulum
ko03110 Chaperones and folding catalysts

ZFIN:

id description
ZDB-GENE-031113-9 Predicted to enable unfolded protein binding activity. Predicted to act upstream of or within protein folding. Is expressed in several structures, including axial mesoderm; blood vessel; nervous system; neural tube; and pectoral fin. Human ortholog(s) of this gene implicated in polycystic kidney disease. Orthologous to human DNAJB11 (DnaJ heat shock protein family (Hsp40) member B11).

Ensembl:

ensembl_id ENSDARG00000015088

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074485 True 2295 mRNA 0.40 10 32641026 32648725

Neighbor

gene id symbol gene type direction distance location
XLOC_037947 satb2 coding downstream 36612 32560399 ~ 32604414 (-)
XLOC_037946 CR391943.1 coding downstream 115655 32525255 ~ 32525371 (-)
XLOC_037945 BX511187.1 coding downstream 282361 32355235 ~ 32358665 (-)
XLOC_037944 rftn2 coding downstream 297353 32312920 ~ 32343673 (-)
XLOC_037943 hspd1 coding downstream 340243 32286605 ~ 32300783 (-)
XLOC_037949 gzm3 coding upstream 5829 32654554 ~ 32656656 (-)
XLOC_037950 gzm3.2 coding upstream 8970 32657695 ~ 32663496 (-)
XLOC_037951 BX571724.2 coding upstream 13589 32662314 ~ 32665462 (-)
XLOC_037952 gzm3.3 coding upstream 18444 32667169 ~ 32668928 (-)
XLOC_037953 gzm3.4 coding upstream 21801 32670526 ~ 32672129 (-)
XLOC_037942 NA non-coding downstream 361839 32271066 ~ 32279187 (-)
XLOC_037940 NA non-coding downstream 372268 32238218 ~ 32268758 (-)
XLOC_037956 BX571724.1 non-coding upstream 96363 32745088 ~ 32747794 (-)
XLOC_037958 NA non-coding upstream 112337 32761062 ~ 32795884 (-)
XLOC_037959 CT030044.1 non-coding upstream 136692 32785417 ~ 32785537 (-)
XLOC_037964 CT030044.2 non-coding upstream 234566 32883291 ~ 32885181 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000009_02228671_02232977 DNAJB11.S, DNAJB11 coding CI01000009 null 2227624 ~ 2232977 (-)