LOC110503486 (LOC106613381)


Basic Information

Item Value
gene id LOC110503486
gene name LOC106613381
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 39091519 ~ 39096712 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036962185.1
ggctaccctgccgcccctccactctaaccactaggctaccctgcagcctctacactctaaccactaggctaccctgccaccccatgttGATGTTTATTCCCCAGGAGGACCAGGGCTCTTCTCCAGAGCTGTTCCACCTGGTAGGGTTTGGTGTTGGGGCCCATGTAGCTGGTGTGACCGGGGCCTGTTTGGAGGGAACAATTGGCAGGATCACAGGCCTGGATCCGTTCTCACCGGTGTTTTCAGAGGCAGACAGCAGCCTGTCTCTGGATCACACTGATGCCCAGTACGTGGATGTGATTCACACCAACTTCAACCCCAATGAGCCGGTAGCTCCCCTGGGGGTTCCCAGACCGTTGGGTCATGTTGATTTCTACATTGGCAGAGGATATCAACTCCCTGGTTGTCCTCAGGCTCTCATGAAaaGGGAGCAGTACTTGCTGTGCAGTCACCAACGGGCCTATAGGTTGTTCACCAGCTCCATCCGGTCCTCCTGCCCTCTCACAGCCTTCCCCTGCCAGGGAGTAGAGGACTTCCAGAGGGCTCTCTGTACACACTGTCACCACCCTGGCCTCAACATCTGCCCCCAGCTGGGCTACGACATCAGCTGGCTGCCTCCAGATCGACCAATCACCTTCCAGCCCCTGACCGCGGTCCTGGACATCACAGCAACGGACCCTTTCTGCGTGACGCCGTTCCTGTTGGAGGTGCACCTGGAGGGAAACACCTCGTTAGAAGCCCAGCTATTTATTCAGCTGAAGGGAGACGTCAGGAAAACACCTGTCATGTTGGTGTCCGGTCCTTCCCTGATGCAGTTTGAGTCTCATCAGATACACCAGTTCCTGGTTTCTGTACGTCACACTGTTCAGGAGTTCAGAACCATAGTACTTCACTTCTACTCTCAACGCCTCCTGTACTTGGCCTGGAGGAAGAGACGGATTCACATCAGTCATCTAGTCCTTGCACAACTACCCAGACACCAGGGGCTAGTATCTTACAGGACCCGGAGTGTTACCGCAGTGGAGAATCACAGAGTGGAAGTGTATCTGCAGAAGGAAGAGTGAAGATggacgggagg

Function

NR:

description
PREDICTED: lipase member H-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036962185.1 True 1078 mRNA 0.55 8 39091519 39096712

Neighbor

gene id symbol gene type direction distance location
LOC118944042 LOC106590898 coding upstream 286 39087111 ~ 39091233 (+)
spred3 spred3 coding upstream 41843 39020800 ~ 39049676 (+)
psmd8 psmd8 coding upstream 101250 38983607 ~ 38990269 (+)
ehd2b LOC106613377 coding upstream 113775 38943424 ~ 38977744 (+)
bicra LOC106613370 coding upstream 158944 38845482 ~ 38932575 (+)
LOC110503192 LOC106613220 coding downstream 110465 39207177 ~ 39235039 (+)
LOC110516717 LOC106581405 coding downstream 141468 39238180 ~ 39350381 (+)
LOC110503405 NA coding downstream 299311 39396023 ~ 39629211 (+)
LOC110503201 NA coding downstream 533951 39630663 ~ 39632379 (+)
trnat-agu-148 NA coding downstream 667947 39764659 ~ 39764732 (+)
G1929453 NA non-coding upstream 8245 39082698 ~ 39083274 (+)
G1929447 dhx34 non-coding upstream 20608 39069510 ~ 39070911 (+)
G1929443 NA non-coding upstream 28038 39062353 ~ 39063481 (+)
G1929438 NA non-coding upstream 39553 39051136 ~ 39051966 (+)
G1929432 NA non-coding upstream 44701 39045419 ~ 39046818 (+)
G1929456 NA non-coding downstream 173 39096885 ~ 39098231 (+)
G1929462 NA non-coding downstream 10055 39106767 ~ 39107963 (+)
G1929467 NA non-coding downstream 45917 39142629 ~ 39143259 (+)
G1929468 NA non-coding downstream 50913 39147625 ~ 39147875 (+)
G1929493 NA non-coding downstream 105969 39202681 ~ 39202938 (+)
ppp1r13l ppp1r13l other upstream 456127 38590146 ~ 38653011 (+)
G1929196 NA other upstream 578414 38509846 ~ 38513105 (+)
G1929037 NA other upstream 892995 38197898 ~ 38198524 (+)
G1929664 NA other downstream 451100 39547812 ~ 39549780 (+)
G1929808 NA other downstream 777566 39874278 ~ 39877275 (+)
G1929816 NA other downstream 791615 39888327 ~ 39889155 (+)
G1929891 NA other downstream 929223 40025935 ~ 40028517 (+)
G1929901 NA other downstream 952652 40049364 ~ 40082173 (+)

Expression


Co-expression Network