trnat-agu-148


Basic Information

Item Value
gene id trnat-agu-148
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 39764659 ~ 39764732 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnat-agu-148
ggtgctgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgagttcaaatctcagcagtgcCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu-148 True 74 mRNA 0.49 1 39764659 39764732

Neighbor

gene id symbol gene type direction distance location
LOC110503201 NA coding upstream 132280 39630663 ~ 39632379 (+)
LOC110503405 NA coding upstream 135448 39396023 ~ 39629211 (+)
LOC110516717 LOC106581405 coding upstream 414278 39238180 ~ 39350381 (+)
LOC110503192 LOC106613220 coding upstream 529620 39207177 ~ 39235039 (+)
LOC110503486 LOC106613381 coding upstream 667947 39091519 ~ 39096712 (+)
LOC110503199 LOC106613203 coding downstream 36005 39800737 ~ 39809748 (+)
LOC110503406 LOC106581179 coding downstream 679038 40443770 ~ 40535727 (+)
LOC110503211 LOC106613213 coding downstream 1045446 40810178 ~ 40837501 (+)
LOC110503202 LOC106613212 coding downstream 1197710 40962442 ~ 40972379 (+)
si LOC106613210 coding downstream 1247946 41012678 ~ 41125378 (+)
G1929727 NA non-coding upstream 36698 39727631 ~ 39727961 (+)
G1929726 NA non-coding upstream 38709 39723258 ~ 39725950 (+)
G1929724 NA non-coding upstream 41463 39720872 ~ 39723196 (+)
G1929710 NA non-coding upstream 85095 39679289 ~ 39679564 (+)
G1929706 NA non-coding upstream 94067 39669607 ~ 39670592 (+)
G1929753 NA non-coding downstream 14412 39779144 ~ 39779519 (+)
G1929758 NA non-coding downstream 47458 39812190 ~ 39814400 (+)
G1929809 NA non-coding downstream 108459 39873191 ~ 39925528 (+)
G1929815 NA non-coding downstream 120287 39885019 ~ 39886406 (+)
G1929840 NA non-coding downstream 157519 39922251 ~ 39922705 (+)
G1929664 NA other upstream 214879 39547812 ~ 39549780 (+)
spred3 spred3 other upstream 715966 39020800 ~ 39049676 (+)
bicra LOC106613370 other upstream 832110 38845482 ~ 38932575 (+)
ppp1r13l ppp1r13l other upstream 1129267 38590146 ~ 38653011 (+)
G1929196 NA other upstream 1251554 38509846 ~ 38513105 (+)
G1929808 NA other downstream 109546 39874278 ~ 39877275 (+)
G1929816 NA other downstream 123595 39888327 ~ 39889155 (+)
G1929891 NA other downstream 261203 40025935 ~ 40028517 (+)
G1929901 NA other downstream 284632 40049364 ~ 40082173 (+)
G1929909 NA other downstream 311744 40076476 ~ 40078332 (+)

Expression


Co-expression Network