XLOC_038040


Basic Information

Item Value
gene id XLOC_038040
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 38351581 ~ 38352885 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075427
ccttcataaaagcacataaacactgttattcttttcataaaatccatgttagccatttagctatgaagctagagttaCCGGGCAGACAGAACCCCTGCCCATTACGCGAATCCgtatctgttctgaagtgaatttgacgcgcgaatgaagcgagtaacctcaaatgttaacacggctatttacgcacgaatagcgcgatttatccacgcgttccgtatctggtgtgaacgcagcatcataAAACTCCTAATGTTTTTTCACTACATTGATAAGTTAGGTTGGTTTGCACAGTTTACATGAATAAACACTAATATTTGACATCAATAACTTACTTTTGCATCTGTATTCACACAATTGGCCAGATAAGCttaatttgctatttttttttattaaacctcAAAAGCAATATCATACCAAAAAGTGTTGAACTCAACAGGAGTTAAAATTATTGCTATAATAACAATACAGTCTATTATGCTGCAAATTCCCAATAGATTCTAGAAAAAAATGGCTTCATTTCATAAATATGggccacattttaaaatatttagctggatttaacaaaccatttacgaGCCAGAGCAAATGCCCAAATTAAAATTCAAAGGCTAATTCAAGAAGTCTTTATCACTCACTCCTAGTCATGAGGAGATGGACAACACGAAAACTATTCATAGCATACATCTGCATGTTTAATAAGGCCAGTAACAATAGAAATTCAGCATCATATAACAATATAACAGCCTCTGAAAACAGATTTCTGTACAGACATGGAATGCGGACTGATCAGAGCTCCTCTCACACAACTGAGGTAGCCCGACAGTTACTCCATATAAACTGAAAGAGGTGCATATCTGGAAATTATTCTCAGCGTGAAAACTGTCTGCCGTCTCCCTTGCCTTTGTTGACATGTTTGAAGATCTTGGCCTTGTGGACGTTTTTAGATTTCTGGTATCCGAAGCCGCCGCCTCCACCTCTCTTATGTAGCTTCACTCCTTTACTGCTGTGAACATCTGAGAGTGCAAACGGTTAAGGAACAAACACGGCAGCTAAATCTAAAACCCTAAAATAAATGCAGTTAAATGGCTTCATGAAAGTAGAAAAGTATgatctttaatatttttattctgcaaGGATGCACAGAATTGATAAAAACTGATTTGAAAAATACTTTGAATTCATGTTAACCATATTACCATATTGTTACCATAATAACcatattaaactatttatttttaaatagtggttgtggattaacttgcatgggTTAATTGTTCACCCAAAGACTAATAATGTGTGCTAGCA

Function

GO:

id name namespace
GO:0032989 cellular component morphogenesis biological_process
GO:0099080 supramolecular complex cellular_component
GO:0099081 supramolecular polymer cellular_component
GO:0099512 supramolecular fiber cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075427 True 1305 lncRNA 0.36 1 38351581 38352885

Neighbor

gene id symbol gene type direction distance location
XLOC_038039 BX548038.3 coding downstream 147053 38204407 ~ 38204528 (-)
XLOC_038038 si:dkey-219c10.4 coding downstream 194687 38140911 ~ 38156894 (-)
XLOC_038037 NA coding downstream 279665 38070084 ~ 38071916 (-)
XLOC_038036 hacd2 coding downstream 308642 38029475 ~ 38042939 (-)
XLOC_038035 adcy5 coding downstream 329584 37872577 ~ 38021997 (-)
XLOC_038041 ccdc93 coding upstream 567 38353452 ~ 38368138 (-)
XLOC_038042 znf142 coding upstream 32676 38385561 ~ 38399432 (-)
XLOC_038043 BX001051.1 coding upstream 116561 38469446 ~ 38469566 (-)
XLOC_038044 NA coding upstream 205754 38558639 ~ 38560263 (-)
XLOC_038045 si:dkey-101k6.5 coding upstream 212015 38564900 ~ 38587275 (-)
XLOC_038034 BX511075.1 non-coding downstream 531369 37817266 ~ 37820212 (-)
XLOC_038031 NA non-coding downstream 1214325 37118184 ~ 37137256 (-)
XLOC_038030 NA non-coding downstream 1331110 37015729 ~ 37020471 (-)
XLOC_038046 NA non-coding upstream 355578 38708463 ~ 38709221 (-)
XLOC_038048 FP016012.1 non-coding upstream 877641 39230526 ~ 39282273 (-)
XLOC_038050 NA non-coding upstream 1557811 39910696 ~ 39939616 (-)

Expression


Co-expression Network