XLOC_038045 (si:dkey-101k6.5)


Basic Information

Item Value
gene id XLOC_038045
gene name si:dkey-101k6.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 38564900 ~ 38587275 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074624
TCTCTATGTATTGTGAATCGTGCTTTGATAAATGTAAGTTCCTGGGCGGATCCGCTCTCACTCACATCTGGATTAAAAACATCTGGATCCGCCTACACGGAACTCAGTTacacgcagagagagagagagagagacccgaACTCTCTCACAGATGAGGCTGGTTTATCTGAGTCTTTGACACGAGCAGATAAAGAAAATAAGGGCATCGCTTCAGTAGTGTGGATCTTCGGAGGACTGTGTGATATTATGGGTCTGTGGACTCGAACATCTGCTCTTCTGTGCTGCTTCTGTCttCTGCAGGTGCAGAGTTTAAGCCCCATAAAGACCAACCTGTGTAAGTGGTGTGATCACTCCAGTCCTGTGTGTGAAGACAACGTCTGCATGAGCAACTGCAGTCTGACCTCTTACTGCTTTCTGGCTGAAGAAGTGTGTGTAGCCATATGGAAGAAGGACAATGTGAGCGTGAGTGTGCGGACGCTGTGTTATGACCCCCAGCATATGCTGGAGAACATAATGCTGGCGAATTACTCGTCCAAGGAGTGTCTGATGAGCCCTCATCCATCTGAAGATGGCCTGCTCTTCATCTGCAGTTGTGTTGGAGATCAGGAGTGTAACGACAGGCTCATCTTTGATAAAGGACCCAATGGATTCTCAAAGCTGAAGTCTAAAGACGTGATTCCAGTCGTGGTCATAAGCCTGGTTCCTCCCCTCTTAGTAGCGGTCATTGCGACCATGGCTTTTTACCTGTATCGCACACGTCAGCCAGGCAAAAAGCCCAAGGAATGGGGACCACGACGGACCCACTACCAGTCTCTTGATCCTGCCGAGGGCCAAGCTAATGGCATCGACTTTAGTGCCAAGCGGCCATCCCTCAGCGATGACATCAATTCAGAAATGTCATCGACTTGTGCCAATAATCTAAACCACAACACGGAGCAGCTGCCCATCCAGCTGGAGGCGCTGGTGGGTAAAGGGCGCTTCGCGGAGGTATGGCGGGCACGACTTAGTCATAATGAAAGCGGGCAGTATGAAACGGTGGCTGTGAAGATTTTTCCAGCAGTGGAGTATTCATCGTGGTGTAACGAAAGAGCCATATTCTCTGATGCCAACTTGAAACATGAGAACGTGGTGCAGTTTCTGACGGCTGAGGAGCGGGGCGGTACGTCTGCCACCTCCCAGAGGCAATACTGGCTCATCATGGCTTATTATAACATGGGCAACCTTCAAGACTTTCTGGTTGGGAATATTCTGACATGGGCAGAGTTGTGTTCACTAGCAGGCTCTGTGGCAAGAGGACTGGCGCACCTGCACAGTGACACGACGCCATGTGGCATACAAAAAGTGCCCATCGCCCATCGAGATCTGAAGAGCAGCAACATTGTGTTGAAGAACCAAAGCGAATGCGTGCTCTGTGATTTCGGCCTGGCTCTGCGACTTGACCTGTCTCTCACTGTAGATGATTTCGCCAACAGTGGACAGGTGGGAACTGCCCGCTATATGGCCCCAGAAGTTCTGGAGTCCAGGGTGAATCTCGAGGACCTGGAGTCCTTTAAACAGATTGATATCTACTCCATGGCTCTAGTGATGTGGGAAATGGTCTCTAGGTGTGACGTCATAGGAGAGGTAAAGAGTTACGAACCTCCATTTGGCTCCAAAGTGTGTGAGCAGCCGTGTGTGGACAGCATGAGAGACCTGGTGTTGAGAGACCGAGGAAGACCAGATATTCCAGACAGCTGGACCACACATTCAGGCATGCAGTTGTTGTGCGCGACTATAACGGAGTGCTGGGATCACGACCCGGAGGCTCGACTGACGGCTCACTGCGTGGTGGAGCGCTTTAACACTCTGGCTCAGGAAGAGCTGGAGAACTCCATCTGCACCCACACACCCTCAACACCACCTACAGAAGACCAAACCCCGACCCTGCCCTCTCACCCACCCTGCACAGACCACAGCGCTGACATCTGTCCGCACGTCACAGCTGACATCGTTTCCTCCAGGCAACATAGTCAAGTTTAA
>TCONS_00074625
CCTGTGTAAGTGGTGTGATCACTCCAGTCCTGTGTGTGAAGACAACGTCTGCATGAGCAACTGCAGTCTGACCTCTTACTGCTTTCTGGCTGAAGAAGTGTGTGTAGCCATATGGAAGAAGGACAATGTGAGCGTGAGTGTGCGGACGCTGTGTTATGACCCCCAGCATATGCTGGAGAACATAATGCTGGCGAATTACTCGTCCAAGGAGTGTCTGATGAGCCCTCATCCATCTGAAGATGGCCTGCTCTTCATCTGCAGTTGTGTTGGAGATCAGGAGTGTAACGACAGGCTCATCTTTGATAAAGGACCCAATGGATTCTCAAAGCTGAAGTCTAAAGACGTGATTCCAGTCGTGGTCATAAGCCTGGTTCCTCCCCTCTTAGTAGCGGTCATTGCGACCATGGCTTTTTACCTGTATCGCACACGTCAGCCAGGCAAAAAGCCCAAGGAATGGGGACCACGACGGACCCACTACCAGTCTCTTGATCCTGCCGAGGGCCAAGCTAATGGCATCGACTTTAGTGCCAAGCGGCCATCCCTCAGCGATGACATCAATTCAGAAATGTCATCGACTTGTGCCAATAATCTAAACCACAACACGGAGCAGCTGCCCATCCAGCTGGAGGCGCTGGTGGGTAAAGGGCGCTTCGCGGAGGTATGGCGGGCACGACTTAGTCATAATGAAAGCGGGCAGTATGAAACGGTGGCTGTGAAGATTTTTCCAGCAGTGGAGTATTCATCGTGGTGTAACGAAAGAGCCATATTCTCTGATGCCAACTTGAAACATGAGAACGTGGTGCAGTTTCTGACGGCTGAGGAGCGGGGCGGTACGTCTGCCACCTCCCAGAGGCAATACTGGCTCATCATGGCTTATTATAACATGGGCAACCTTCAAGACTTTCTGGTTGGGAATATTCTGACATGGGCAGAGTTGTGTTCACTAGCAGGCTCTGTGGCAAGAGGACTGGCGCACCTGCACAGTGACACGACGCCATGTGGCATACAAAAAGTGCCCATCGCCCATCGAGATCTGAAGAGCAGCAACATTGTGTTGAAGAACCAAAGCGAATGCGTGCTCTGTGATTTCGGCCTGGCTCTGCGACTTGACCTGTCTCTCACTGTAGATGATTTCGCCAACAGTGGACAGGTGGGAACTGCCCGCTATATGGCCCCAGAAGTTCTGGAGTCCAGGGTGAATCTCGAGGACCTGGAGTCCTTTAAACAGATTGATATCTACTCCATGGCTCTAGTGATGTGGGAAATGGTCTCTAGGTGTGACGTCATAGGAGAGGTAAAGAGTTACGAACCTCCATTTGGCTCCAAAGTGTGTGAGCAGCCGTGTGTGGACAGCATGAGAGACCTGGTGTTGAGAGACCGAGGAAGACCAGATATTCCAGACAGCTGGACCACACATTCAGGCATGCAGTTGTTGTGCGCGACTATAACGGAGTGCTGGGATCACGACCCGGAGGCTCGACTGACGGCTCACTGCGTGGTGGAGCGCTTTAACACTCTGGCTCAGGAAGAGCTGGAGAACTCCATCTGCAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000055136

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074624 False 2019 mRNA 0.51 7 38564900 38587275
TCONS_00074625 True 1551 mRNA 0.52 6 38565039 38579758

Neighbor

gene id symbol gene type direction distance location
XLOC_038044 NA coding downstream 4637 38558639 ~ 38560263 (-)
XLOC_038043 BX001051.1 coding downstream 95334 38469446 ~ 38469566 (-)
XLOC_038042 znf142 coding downstream 165468 38385561 ~ 38399432 (-)
XLOC_038041 ccdc93 coding downstream 196762 38353452 ~ 38368138 (-)
XLOC_038040 NA coding downstream 212015 38351581 ~ 38352885 (-)
XLOC_038046 NA coding upstream 121188 38708463 ~ 38709221 (-)
XLOC_038047 myl1 coding upstream 406957 38994232 ~ 39005317 (-)
XLOC_038048 FP016012.1 coding upstream 643251 39230526 ~ 39282273 (-)
XLOC_038049 erbb4b coding upstream 726669 39313944 ~ 39624173 (-)
XLOC_038050 NA coding upstream 1323421 39910696 ~ 39939616 (-)
XLOC_038039 BX548038.3 non-coding downstream 360372 38204407 ~ 38204528 (-)
XLOC_038037 NA non-coding downstream 492984 38070084 ~ 38071916 (-)
XLOC_038052 NA non-coding upstream 1493615 40080890 ~ 40350169 (-)
XLOC_038053 BX936447.1 non-coding upstream 1797855 40385130 ~ 40385247 (-)

Expression


Co-expression Network