XLOC_038046



Basic Information


Item Value
gene id XLOC_038046
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 38708463 ~ 38709221 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00075430
TCTTCTTTACCATACATTTCTGACTACAACGCCAGATTGAAATAACCATCCACAGAGGAAATACTAATGAGTTAGGAAAGCAGTCTCTGATATTTAAGATTACAAATACAGCACATCTCACAAGATCACACATCAGATCAAACAAAATGGACACCTGGTAGCAGGTTGAGTCCATCTCATGCACCACTAACCATCCACACGGACACAAATCACTGAGGGTTTAAGAGAGATCCTCAAACAATACTACAGTATATCGTCATCTGAAATGGaaaccttaaataaaataaattagataacTAAAAGGCAGCACTGCATTTAATGATTATTACTGTAGTTCATACACCGGTAATACCTTGTGGCAATATTTGCTACATTTCACACGAATGCTGCATCCAGTAATATTCGGTTTCAAACTCCGACCAGTTTTTACACAGGTTTAGTTCTCCAGCGTGAATCTCACAATGTttctctgatttaaaaaaaaattaaagtaaaaaaataaaaatcacgacAATGttttaaagcataggtctcaaactggattcctggagggaattgagtttgagaccactgcaaagcagcttccgggtccaagccatcAATAAAACTGTATGAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00075430 True 616 lncRNA 0.37 2 38708463 38709221

Neighbor


gene id symbol gene type direction distance location
XLOC_038045 si:dkey-101k6.5 coding downstream 121188 38564900 ~ 38587275 (-)
XLOC_038044 NA coding downstream 148200 38558639 ~ 38560263 (-)
XLOC_038043 BX001051.1 coding downstream 238897 38469446 ~ 38469566 (-)
XLOC_038042 znf142 coding downstream 309031 38385561 ~ 38399432 (-)
XLOC_038041 ccdc93 coding downstream 340325 38353452 ~ 38368138 (-)
XLOC_038047 myl1 coding upstream 285011 38994232 ~ 39005317 (-)
XLOC_038048 FP016012.1 coding upstream 521305 39230526 ~ 39282273 (-)
XLOC_038049 erbb4b coding upstream 604723 39313944 ~ 39624173 (-)
XLOC_038050 NA coding upstream 1201475 39910696 ~ 39939616 (-)
XLOC_038051 ikzf2 coding upstream 1250897 39960118 ~ 40073255 (-)
XLOC_038040 NA non-coding downstream 355578 38351581 ~ 38352885 (-)
XLOC_038039 BX548038.3 non-coding downstream 503935 38204407 ~ 38204528 (-)
XLOC_038037 NA non-coding downstream 636547 38070084 ~ 38071916 (-)
XLOC_038052 NA non-coding upstream 1371669 40080890 ~ 40350169 (-)
XLOC_038053 BX936447.1 non-coding upstream 1675909 40385130 ~ 40385247 (-)
XLOC_038054 NA non-coding upstream 1679359 40388580 ~ 40484854 (-)

Expression



Co-expression Network