XLOC_038048 (FP016012.1)



Basic Information


Item Value
gene id XLOC_038048
gene name FP016012.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 39230526 ~ 39282273 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00074627
GTGCCATGCGGAGCTGAGGAGAAGAAAATGATGTGAAAGTCACCCTTTTGTTAGAGTGGCTGCATCCTTGGAGGATTGCTGTCTGAAATGACAAACTTTCAGAGCCAACAAGTGTTTCTGACACTCGCAGAAATGCCAATCCATCCAAAGGTGATGGACATGGAGCAGAGAACCTCAAACCTGCAAACGAATGCCAACGACCTGCGAGAATCAGCGTGCACTTCAAATTCAGTGCGCACTGACAAGAGGGATGAAGTGTGTTTGTCTGCATTTCCATACGTGCCGAGACTACAAGCAagaaacacatacacacgcaaAGGGAAGACAACCGTTCTGGGTGTGATGTCAATTTTTATGTGCGTCTCCTGTGGCGGAGTTGCTTTCACTTGTCAGCCTGCTTGTTTAAGAACTCGCCTGTAAGGGCTCAGATCATCTCCAGATTGAAGATTCTTTTGGGTCGATTCTTTCTGCGTGCACATACACCAAGCATGCTGGAGAAGGGAAATGAGGTGGAAAGAGATGCCCACCCATTGATCGGTTCTGCTCTGATGTTCTTACTCACATCCTGCATATGCAAATTaactttttgcttaaaataatgacaatttttagTTGCTGTGAGCATGGTTTTATGCTTATGTGATGAATTGATTGTGACTCCTCTTAAAGAGGTCAtcaaatgtacttttaataatgaATTGCTACTCagcattgtttaaaatgtgtatacATA
>TCONS_00075431
GGGAAAATATTGTATAAATGTCCTCGGTTGCAGCCTGAACTGGTTTGATTCTAAAGAGTGGATACTGATGCTGAAACCAGTGTTTATAGACAGTACAACACGCTGTTAAAGATCTACTGAACTCATCCAGTGAAGAACAACTTGACCAAAACAGTGAGAAGGATCCTCGAAATGTGCCATGCGGAGCTGAGGAGAAGAAAATGATGTGAAAGTCACCCTTTTGTTAGAGTGGCTGCATCCTTGGAGGATTGCTGTCTGAAATGACAAACTTTCAGAGCCAACAAGTGTTTCTGACACTCGCAGAAATGCCAATCCATCCAAAGGTGATGGACATGGAGCAGAGAACCTCAAACCTGCAAACGAATGCCAACGACCTGCGAGAATCAGCGTGCACTTCAAATTCAGTGCGCACTGACAAGAGGGATGAAGTGTGTTTGTCTGCATTTCCATACGTGCCGAGACTACAAGCAagaaacacatacacacgcaaAGGGAAGACAACCGTTCTGGGTGTGATGTCAATTTTTATGTGCGTCTCCTGTGGCGGAGTTGCTTTCACTTGTCAGCCTGCTTGTTTAAGAACTCGCCTGTAAGGGCTCAGATCATCTCCAGATTGAAGATTCTTTTGGGTCGATTCTTTCTGCGTGCACATACACCAAGCATGCTGGAGAAGGGAAATGAGGTGGAAAGAGATGCCCACCCATTGATCGGTTCTGCTCTGATGTTCTTACTCACATCCTGCATATGCAAATTaactttttgcttaaaataatgacaatttttagTTGCTGTGAGCATGGTTTTATGCTTATGTGATGAATTGATTGTGACTCCTCTTAAAGAGGTCAtcaaatgtacttttaataatgaATTGCTACTCagcattgtttaaaatgtgtatacATA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095376

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00074627 False 733 processed_transcript 0.43 2 39230526 39255210
TCONS_00075431 True 906 lncRNA 0.43 4 39230526 39282273

Neighbor


gene id symbol gene type direction distance location
XLOC_038047 myl1 coding downstream 225209 38994232 ~ 39005317 (-)
XLOC_038046 NA coding downstream 521305 38708463 ~ 38709221 (-)
XLOC_038045 si:dkey-101k6.5 coding downstream 643251 38564900 ~ 38587275 (-)
XLOC_038044 NA coding downstream 670263 38558639 ~ 38560263 (-)
XLOC_038043 BX001051.1 coding downstream 760960 38469446 ~ 38469566 (-)
XLOC_038049 erbb4b coding upstream 31671 39313944 ~ 39624173 (-)
XLOC_038050 NA coding upstream 628423 39910696 ~ 39939616 (-)
XLOC_038051 ikzf2 coding upstream 677845 39960118 ~ 40073255 (-)
XLOC_038052 NA coding upstream 798617 40080890 ~ 40350169 (-)
XLOC_038053 BX936447.1 coding upstream 1102857 40385130 ~ 40385247 (-)
XLOC_038040 NA non-coding downstream 877641 38351581 ~ 38352885 (-)
XLOC_038039 BX548038.3 non-coding downstream 1025998 38204407 ~ 38204528 (-)
XLOC_038054 NA non-coding upstream 1106307 40388580 ~ 40484854 (-)
XLOC_038055 CU367848.1 non-coding upstream 1227256 40509529 ~ 40509643 (-)

Expression



Co-expression Network