XLOC_038068


Basic Information

Item Value
gene id XLOC_038068
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 41095446 ~ 41101432 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075012
ATGATtgtttgattatgtttttttatttatcagttaCGTTCTTCTCTTACTGCTCTAGGCTGCGCTTTGGATCAGTGACAGCTATTTCCCAACTGTTTGGCTTTGTTCTGCTCTTCTCAATAGCATCCAGATTTACTCTATTGAGCCAAGCTGCATATGAGATGATGGAGACTGACACAGACTGAGCACCATCTCTACATCTGGGCCACACAGAAACCACACAGACAGACACTGAACACTTTGCAAGACAAACTAAGAGGAGGGAAAGGAAACCAACACTGCAGTCAACTGAAGATGTGGACGAACAACATGCTGAGAAGGAGACACGCGAGGTTGAAGACGGCGAGAGACACTACTGATGAGGAGACACAACACTGAGGTAGCTGAGACCAACTGAATGTAAATTGTGTATGGACACATGTAGAATTAAACCGCCTGTTGGAGGAAAACTGACAGCAGTTGTGTGAACTTGAAGGCTACAGGATGTCTGATGGATTTTGTAACAAGAATGATGCTGAAGtaccaaacagtaaaaaaaaaacacacaaaatcttTTGAAGGTGAAGATGTCACATTACAGCATAGGATAGTAACTGTCAAACCAATGTTCAACTGTAGTGTAGAAGAGCTGTAAATGTCACTAAAAGTTAAAGGTCCAGGTGTATCAATGCATTCGGttccagggctcaacaataaggactgcccgatggcccggggccagcgtgagagaagctcgggacagtagacagaatcgttactggcccgatcaagCCACTGATGCCCTGTCACTAAAGTTTGTCTGTAAATATTTGTCAATCGCATGCAAATATAGTCAGAATCGAGAAACAGTGTCTGTTTTTAAGACTTCGAATGCTAACTTCTCTGTTTCTCTTATCTGATTGAATGTTTTGAGCACGTTATTTTtccgtaacaaccagtacagcgaagagacagcaacatgacggcaacatcaagtgatgaggctaaaggaaaacatttgtttctaatgtcttggaagcagacatttacaagggtacaccacgactaaaaaaaatgaatgaagtgttttgtacagtttgccatcagtttggcaggtcagctatcttatgttttgcaataaaatacctgcacattttgctacttttgtttgcaaaacactttgaattttgttcattatctattattaacaaatattgaaattctagatttacaaacattttaacacatttttatatttgtggctaaTAAAtagctttaaactttttttttggtagggccagtgaaaatattggcagggcaagtaaaaatctgaaccactggtccgatcgggccagtagaaaaaatccttagcgttgaaccctgtgtgCTTAATTGAAacattctttgcaaattcttTTACATTTCTGTAACTTAGTTTCTTTCACTGTGTGTATGAGTTGTTTTGCTGATGTTTCATCCTGTCTTATGTAAACGATATGATGTATTCCTCCAGAAATTACTTTTTCCTCAGTGCCTGAATAAAAATATCTATTGtatgaatgtaaataaatggaGGATGTGTTGTTAActcatttattgtttatgttctTCACAATAACAAAACTGGTACATCAAAACCAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075012 True 1621 lncRNA 0.38 2 41095446 41101432

Neighbor

gene id symbol gene type direction distance location
XLOC_038067 asdurf coding downstream 5103 41079669 ~ 41090343 (-)
XLOC_038065 ankar coding downstream 17512 41045874 ~ 41077934 (-)
XLOC_038066 CT737230.1 coding downstream 22511 41072820 ~ 41072935 (-)
XLOC_038064 adat3 coding downstream 54954 41035925 ~ 41040492 (-)
XLOC_038063 BX323586.2 coding downstream 70384 40943119 ~ 41025062 (-)
XLOC_038069 wdr75 coding upstream 18726 41120158 ~ 41156972 (-)
XLOC_038070 NA coding upstream 69170 41170602 ~ 41172834 (-)
XLOC_038071 NA coding upstream 151681 41253113 ~ 41254792 (-)
XLOC_038072 glsb coding upstream 171799 41273231 ~ 41351426 (-)
XLOC_038073 nab1b coding upstream 266416 41367848 ~ 41401564 (-)
XLOC_038059 CR932999.1 non-coding downstream 318105 40767055 ~ 40777341 (-)
XLOC_038057 NA non-coding downstream 476431 40618165 ~ 40619015 (-)
XLOC_038055 CU367848.1 non-coding downstream 585803 40509529 ~ 40509643 (-)
XLOC_038074 CR735121.1 non-coding upstream 344359 41445791 ~ 41446719 (-)
XLOC_038076 BX571827.1 non-coding upstream 457923 41559355 ~ 41561498 (-)
XLOC_038079 NA non-coding upstream 1025304 42126736 ~ 42158404 (-)

Expression


Co-expression Network