G1929196


Basic Information

Item Value
gene id G1929196
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 38509846 ~ 38513105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206278
TGCATTTTGAAAAGGGGCAAGTTTTTTTGTTGCTGTGAGCCAACGGTAACCTAGGTAACATGTTGTTtttccccccccccacagttcAATCTAATACCGACCGGGACTATTTTTGAACATGGTTCAATGCAACGATAAATCAGCTAGGCAGCATCTTGGAGCTAAAATTGGAATCATGTATACCAGGGGGTTGAGCAAGTACTATTTGAGAAGGTTCCGGTCATACACATTTCCTAGGTGGAAAAGGGTCTGGATGGATATTGTCGGAAACAAACCCCCACCTCACAACACGTgtgaccccaaactgttgacACTACAGAGAAAAAAGAATTGCAGTTTTAAAATGTACTTCCTACCACAGAGTGAAGGTAAAAATGTAgccgttttaaagctaatttcctgcaattccacaCACTTATTTGTTGTTATATGATACTAGTTGtcaaacctcaaccaaattcttaaaatatatatacagtgcattcggaaagtattcagaccccttgactttttccacattttgttattattattctaaaatggatgaaataaaaaagtattcctcatcagtctacacacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacgataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgacatcacaataccccataatgaataaGCGAAACCAGATTTTTAGACTTTTTAgaaaatttacataagtattcagaccctttgctatgagactcgaaattgagctcaggtgcatcctgattccattgaacatccttgagatgtttccacaatttgattggagtccacctgtggtaaattcaattgattggacatgatttggaaaggcacacacctgtctatataaggtctcacagttgacagtgcatttcagagcaaaaaccaagccatgaggtcgaaggaattatccgtagagctcagagacaggattgtgtcgaggtacagaggtggggaagggtaccaaaacatttctgcaacattgaaggtctccaagaacacagtggcctccataattctgaaatggaagtagtttggaaccaccaagactcttcctaaagctggctgcccggccaaactgagcaatcggaggagaagggccttggtcagggaggtgaccaagaacactcctcagcaaaaggcacatgacagcccacttggagtttgccaaaaggcacctaaaggactctcagaccatgagaaacaagattctctggtctgatgaaaccaagattgaactcttggcctgaatgccaagcgtcacatctggaggaaacatggcaccatccctacggtgaagcatggtggtggcagcatcatgttgtggggatgtttttcaatggccaggactgggagactagtcaggatcgagggaaagatgaacggagcaaagtacagagagatccttgatggaaatctgctccagagcgctcaggacctcagactggggcgaaggttcaccttccagcaggacaacgaccctaagcacacagccaagataacgcaggagtggcttcaggacaagtctctgaatgtccttgagtggcccagccagagcccagattttaacccgatcaaacatctctggatagacctgaaaatagctgtgcagcgacactccccatccaacctgacagagcttgagaggatctgcagatgtTACTGATGTGaaatgactagctagttagcggtggtgcgcgtttcaatcggtgacgtcacttgcttgctttggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttaagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgattcttcacaaaaaaatgtggcaaaaggtcgcaaagttcaagggggctgaatactttcgcaaggcactgtacatgtcatatttccgtttttatttttataaatttgctaaaattatttttaaaaatatactgtttttgctttgtcattatgggtgattgtgtgtagattgatgagggaaaacaatgatttaatcaattttagaataaggctggaatgtaacatgtggaaaaaaatcaaggggtctgaatactttctgaatgcagtgtATATCTATTATTTGTTGTTTAATTGGGATCCATGGTCCGTGTTGACCCTGTTCTGGGTCCGTGTTGACCCTGTTCTGGTTCCATGGTATGTGTTGACCCTGTTCTGGGTCCATGTTGACCCTGTTCTGGGTCCATGGTCCGTGTTGACCCTGTTCTGGGTCCATGGTCCGTGTTGACCCTGTTCTGGGTCCATGGTCCGTGTTGACCCTGTTCTGGGTCCGTATTGACCCTGTTCTGGGTCCATGGTCCGTGTTGACCCTGTTCTGTGTCCATGGTCCGTGTTGACCCTGTTCTGGGTCCGTGTTGACCCTGTTCTGGGTCCATGGTCCGTGTTGACCCTGTTCTGGGTCCATAATCCGCGTTGACCCTGTTCTGGGTCCGTGTTGACCCTGTTTTGGGTCCGTGTTGACCCTGGTCTGGGTCCGTGTTGACCCTGTTCTGAGTCCGTAATCCGTGTTGACCCTGTTTTGGGTCCGTGGGTCCGTAATCCGTATTGACCCTGTTCTGGGTCCGTGGGTCCGTAATCCGTGTTGACCCTGTTCTGGGTCCGTAATCCGTGTTGACCCTGTTCTGGATCCGTAATCCGTGTTGACCCTGTTCTGGGTCCGTAATCCGTATTCCGTAttaatctggacccctacaaatcagccgggctagacaatctggaccctttctttctaaaattatctgccgaaattgttgccacccctattactagcctgttcaacctctctttcgtgtcgtctgagattcccaaagattggaaagcagctgcggtcatccccctcttcaaagggggggacactcttgacccaaactgctacagacctatatctatcctaccatgcctttctaaggtcttcaaaagccaagtcaacaaacagattaccgaccattttgaatctcaccataccttctctg

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206278 True 3205 TUCP 0.45 3 38509846 38513105

Neighbor

gene id symbol gene type direction distance location
LOC110511668 LOC106591056 coding upstream 388068 38039863 ~ 38121778 (+)
LOC118944107 NA coding upstream 530716 37976645 ~ 37979130 (+)
LOC110511319 LOC106613336 coding upstream 536300 37946663 ~ 37973546 (+)
or112-1 LOC106613329 coding upstream 1067200 37440826 ~ 37442646 (+)
LOC110503430 LOC106613330 coding upstream 1077729 37431071 ~ 37432117 (+)
LOC110503272 NA coding downstream 13779 38526884 ~ 38527767 (+)
ppp1r13l ppp1r13l coding downstream 77041 38590146 ~ 38653011 (+)
LOC118944104 NA coding downstream 207677 38711025 ~ 38736584 (+)
tmem91 tmem91 coding downstream 224364 38737469 ~ 38757769 (+)
bckdha bckdha coding downstream 257735 38770840 ~ 38793470 (+)
G1929190 NA non-coding upstream 33186 38476367 ~ 38476660 (+)
G1929187 NA non-coding upstream 36597 38472791 ~ 38473249 (+)
G1929183 NA non-coding upstream 42300 38466684 ~ 38467546 (+)
G1929171 NA non-coding upstream 69927 38439704 ~ 38439919 (+)
G1929076 NA non-coding upstream 238143 38271246 ~ 38271703 (+)
G1929175 NA non-coding downstream 10846 38523951 ~ 38524478 (+)
G1929200 NA non-coding downstream 32571 38545676 ~ 38546801 (+)
G1929177 NA non-coding downstream 51702 38564807 ~ 38565928 (+)
G1929174 NA non-coding downstream 56772 38569877 ~ 38570735 (+)
G1929213 NA non-coding downstream 60689 38573794 ~ 38575366 (+)
G1929037 NA other upstream 311322 38197898 ~ 38198524 (+)
G1928851 NA other upstream 875687 37633215 ~ 37634159 (+)
G1928756 NA other upstream 1045208 37445561 ~ 37464638 (+)
G1928752 NA other upstream 1074405 37434903 ~ 37435441 (+)
bicra LOC106613370 other downstream 418734 38845482 ~ 38932575 (+)
spred3 spred3 other downstream 507728 39020800 ~ 39049676 (+)
G1929664 NA other downstream 1034707 39547812 ~ 39549780 (+)
G1929808 NA other downstream 1361173 39874278 ~ 39877275 (+)

Expression


Co-expression Network