G1929223


Basic Information

Item Value
gene id G1929223
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 38763203 ~ 38765223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206311
agaggggtgtagagagggagagaggggtgtagagagggagagaggggtgtagagagggagaggggtgtagagggtgagaggggtgtagagagggagaggggtgtagagagggagagaggggtgtagagagggagagaggggtgtagagagggagagagtggtatagagggtgagagaggggtgtagagagggagaggggtgtagagagggctgtagatggagagaggggtgtagagagggagagaggggtgtagagtgagagaggggtgtagagggtgagaggtgtgtagagagggagagaagggtgtagagagggagagaagggtgtagagagggagagaggggtgtagagagggagagaggggtgtagagagggagagaggggtgtagagagggtgagaggggtgtagagagggagagaggggtgtagagagggagagagggctgtagagagggagaaagggctgtagagggtgagaggggtgtagagagggtgagaggggtgcAGAGAGGGCGAGAAAGGGCTAGACCCTGCTGCCTGCGTGGCAGCATGATTCATTCCATTAAGAGAAGCTACTCCTGCAGGACACCGTCCACTCCCCGCTGACCAAATATAGACTGGCTATTCTCTCCTCCGTACGCAGCCACTTTGGGGGATTGCCATGCACCtatgagactctctctctctctcctagacaGGATGGGAATGTTTAAACAACCATGCCATCATAACATGAAGCAATTCTTCTATGATAAATCAACGACGGACTCCATATTCAGCCGATGTCACCATTGATACCCTACAGAAAGCTGAAGGGCACATACAGTTTGTTACAAACCACAACACGATGTCACAGCAGCCTGGTATGTTCTCCGTGGACATTCTAATCTACACAGTGAGACGGGAGTGACTGGGGCACAGCCTTCTTGTATACTAACTAACTCGATGCCAAGCGCGCATCCTTTTCTCCTACACGTAAACAGGTAGACTCGGCGATATGACTtcgatgcagaaagtaaacagcgaGTCCAATTTCCACAACAACTAAGAACCTTGAAGTGCGAGTCTCAACTTCTCCGGACGTTTTGGTCCCGTGGCGCTAACACGTTGTTACACGCTACTGACGAGGCGCTACTGACGAGGTCTGTCGACGTACTACTGACGACCACGTTGTTATAATGTATGAAACAACCCATTGAACAGATACTGTCTGACAAGTGTTTGGAGCGAATTGGAGCTTCGCAATTTTTTTTGTTCAACTGCTGATCGTGACGTCGTCATTTTGCGGAGTCAACCTTCAAAAGTCAACCGGTGAATTAGCACTTTGACATGTTTCCCTTTGCTAAGTGCTTCAACGTCCCTTCTCTGTCTGGAATGATCCTAACAATGACAAGATGTCTAGCCACTTCAGTGCTCAGTTCTTCAGGAGCTCAGTGTGCCATAAAGACAGACTAAACGTACTGACATTTTCTAATTACATATCTAGGTTTTAGAGATCCAGTGGGTCACCGGTTGTTTCTTTCCAACGAaaggaatgttttttttcccagAGAATCAGTGTTGTGTCAAGACTGAGTTTTGATTTCATGAAAAACACAGGAATAAtaattgagaaaaaaaacacactttAGAAACCATAACAACTAAATGTGACTGCCAGTACTGGTGACATACTACTGACGAGGTCTGTCGACGCGCTACTGATGAGGTCTGTCGACATGCTACTGATGAGGTCTGTCAACACGCTACTGATGAGGTCTGTCGACGCGCTACTGAGGAGGTCTGTCAACACTGGCCGGGGTTAGACAGAGAAAACAACAAAGTACTTTTGAGATTCACCCCGTGTGTTGATCATTCAGTctagtcagaggtcaggggtcaggtgaACGAGCGTGAGCTGATCAGGTGTACCTGTACTGTTGTCGTTCACAACCCTTTGTGTTATGATGAAATGTACATAGAAAAAGACGACCGACGTAATAAAAGACACTTGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206311 True 1997 lncRNA 0.49 2 38763203 38765223

Neighbor

gene id symbol gene type direction distance location
tmem91 tmem91 coding upstream 5434 38737469 ~ 38757769 (+)
LOC118944104 NA coding upstream 26619 38711025 ~ 38736584 (+)
ppp1r13l ppp1r13l coding upstream 110192 38590146 ~ 38653011 (+)
LOC110503272 NA coding upstream 235436 38526884 ~ 38527767 (+)
rasgrp4 rasgrp4 coding upstream 240037 38463435 ~ 38523166 (+)
bckdha bckdha coding downstream 5617 38770840 ~ 38793470 (+)
bicra LOC106613370 coding downstream 80259 38845482 ~ 38932575 (+)
ehd2b LOC106613377 coding downstream 178201 38943424 ~ 38977744 (+)
psmd8 psmd8 coding downstream 218384 38983607 ~ 38990269 (+)
spred3 spred3 coding downstream 255577 39020800 ~ 39049676 (+)
G1929291 NA non-coding upstream 151 38762391 ~ 38763052 (+)
G1929299 NA non-coding upstream 40588 38722147 ~ 38722615 (+)
G1929286 NA non-coding upstream 70562 38681804 ~ 38692641 (+)
G1929284 NA non-coding upstream 74179 38682223 ~ 38689024 (+)
G1929320 NA non-coding downstream 47468 38812691 ~ 38813024 (+)
G1929321 NA non-coding downstream 48216 38813439 ~ 38814016 (+)
G1929228 NA non-coding downstream 51167 38816390 ~ 38817249 (+)
G1929322 NA non-coding downstream 65554 38830777 ~ 38831377 (+)
G1929357 NA non-coding downstream 116152 38881375 ~ 38883381 (+)
G1929196 NA other upstream 250098 38509846 ~ 38513105 (+)
G1929037 NA other upstream 564679 38197898 ~ 38198524 (+)
LOC110511668 LOC106591056 other upstream 655977 38039863 ~ 38121778 (+)
G1928851 NA other upstream 1129044 37633215 ~ 37634159 (+)
G1929664 NA other downstream 782589 39547812 ~ 39549780 (+)
G1929808 NA other downstream 1109055 39874278 ~ 39877275 (+)
G1929816 NA other downstream 1123104 39888327 ~ 39889155 (+)

Expression


Co-expression Network