G1929320


Basic Information

Item Value
gene id G1929320
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 38812691 ~ 38813024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206440
gtatatagcctctctactgtactgtatataacctctctactgtatgtagcctctctactgtatatagcctctactgtatatagcctctctactgtactgtatatagcttctctactgtatatagcctctctactgtatatagcctctctactgtatatagcctctactgtatatagcctcactactgtatatagcctctctactgtactgtatatagcctctctactgtatgtagcccctctactgtatatagcctcactactgtatatagcctctctactgtatatagcctctctactgtatgtagcccctctactgtatatagcctcactac

Function

NR:

description
PREDICTED: collagen EMF1-alpha-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206440 True 334 lncRNA 0.40 1 38812691 38813024

Neighbor

gene id symbol gene type direction distance location
bckdha bckdha coding upstream 19221 38770840 ~ 38793470 (+)
tmem91 tmem91 coding upstream 54922 38737469 ~ 38757769 (+)
LOC118944104 NA coding upstream 76107 38711025 ~ 38736584 (+)
ppp1r13l ppp1r13l coding upstream 159680 38590146 ~ 38653011 (+)
LOC110503272 NA coding upstream 284924 38526884 ~ 38527767 (+)
bicra LOC106613370 coding downstream 32458 38845482 ~ 38932575 (+)
ehd2b LOC106613377 coding downstream 130400 38943424 ~ 38977744 (+)
psmd8 psmd8 coding downstream 170583 38983607 ~ 38990269 (+)
spred3 spred3 coding downstream 207776 39020800 ~ 39049676 (+)
LOC118944042 LOC106590898 coding downstream 274087 39087111 ~ 39091233 (+)
G1929223 NA non-coding upstream 47468 38763203 ~ 38765223 (+)
G1929291 NA non-coding upstream 49639 38762391 ~ 38763052 (+)
G1929299 NA non-coding upstream 90076 38722147 ~ 38722615 (+)
G1929286 NA non-coding upstream 120050 38681804 ~ 38692641 (+)
G1929321 NA non-coding downstream 415 38813439 ~ 38814016 (+)
G1929228 NA non-coding downstream 3366 38816390 ~ 38817249 (+)
G1929322 NA non-coding downstream 17753 38830777 ~ 38831377 (+)
G1929357 NA non-coding downstream 68351 38881375 ~ 38883381 (+)
G1929370 NA non-coding downstream 93654 38906678 ~ 38920473 (+)
G1929196 NA other upstream 299586 38509846 ~ 38513105 (+)
G1929037 NA other upstream 614167 38197898 ~ 38198524 (+)
LOC110511668 LOC106591056 other upstream 705465 38039863 ~ 38121778 (+)
G1928851 NA other upstream 1178532 37633215 ~ 37634159 (+)
G1929664 NA other downstream 734788 39547812 ~ 39549780 (+)
G1929808 NA other downstream 1061254 39874278 ~ 39877275 (+)
G1929816 NA other downstream 1075303 39888327 ~ 39889155 (+)

Expression


Co-expression Network