G1929321


Basic Information

Item Value
gene id G1929321
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048588.1
NCBI id CM023242.2
chromosome length 45930806
location 38813439 ~ 38814016 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2206441
ctactgtactgtatatagcttctctactgtatatagcctctctactgtatatagcctcaatactgtatatagcctcaatactgtatatagcctctctactgtatatagcctctctactgtatatagcctctactgtatatagcctctactgtatatagcctctctactgtatatagcctctctactgtatatagcctctctactgtatatagcctcaatactgtatatagcctctctactgtatatagcctctctactgtatatagcctctctactgtatatagcctctctactgtatatagcctctctactgtatatagcctctctactgtatataacctcactactgtatatagcctctactgtatatagcctctctactgtatatagcctctctactgtatatagcctctactgtatatagcctctctactgtatatagcctctctactgtatatagcctctctactgtatatagcctctctactgtctttttactgttgttttatttctttacctacctattgttcaccaaataccttttttgcacttttGGTTAGCGCCTGTAAGtaacattt

Function

NR:

description
PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2206441 True 578 lncRNA 0.37 1 38813439 38814016

Neighbor

gene id symbol gene type direction distance location
bckdha bckdha coding upstream 19969 38770840 ~ 38793470 (+)
tmem91 tmem91 coding upstream 55670 38737469 ~ 38757769 (+)
LOC118944104 NA coding upstream 76855 38711025 ~ 38736584 (+)
ppp1r13l ppp1r13l coding upstream 160428 38590146 ~ 38653011 (+)
LOC110503272 NA coding upstream 285672 38526884 ~ 38527767 (+)
bicra LOC106613370 coding downstream 31466 38845482 ~ 38932575 (+)
ehd2b LOC106613377 coding downstream 129408 38943424 ~ 38977744 (+)
psmd8 psmd8 coding downstream 169591 38983607 ~ 38990269 (+)
spred3 spred3 coding downstream 206784 39020800 ~ 39049676 (+)
LOC118944042 LOC106590898 coding downstream 273095 39087111 ~ 39091233 (+)
G1929320 NA non-coding upstream 415 38812691 ~ 38813024 (+)
G1929223 NA non-coding upstream 48216 38763203 ~ 38765223 (+)
G1929291 NA non-coding upstream 50387 38762391 ~ 38763052 (+)
G1929299 NA non-coding upstream 90824 38722147 ~ 38722615 (+)
G1929228 NA non-coding downstream 2374 38816390 ~ 38817249 (+)
G1929322 NA non-coding downstream 16761 38830777 ~ 38831377 (+)
G1929357 NA non-coding downstream 67359 38881375 ~ 38883381 (+)
G1929370 NA non-coding downstream 92662 38906678 ~ 38920473 (+)
G1929196 NA other upstream 300334 38509846 ~ 38513105 (+)
G1929037 NA other upstream 614915 38197898 ~ 38198524 (+)
LOC110511668 LOC106591056 other upstream 706213 38039863 ~ 38121778 (+)
G1928851 NA other upstream 1179280 37633215 ~ 37634159 (+)
G1929664 NA other downstream 733796 39547812 ~ 39549780 (+)
G1929808 NA other downstream 1060262 39874278 ~ 39877275 (+)
G1929816 NA other downstream 1074311 39888327 ~ 39889155 (+)

Expression


Co-expression Network